UBERON:0005297: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=check primary vs testis | |comment=check primary vs testis | ||
|created_by= | |created_by= | ||
| | |def="The testis cords are precursors to the rete testis. They play several different roles in the development of the male genitals[WP]." [Wikipedia:Testis_cords] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=UBERON:0010141 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0005297 | |||
|is_a=UBERON:0004910 ;;UBERON:0005295 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=testis sex cord | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000473 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="primary sex cord" RELATED [];;"testis cord" EXACT [MP:0006424];;"testis primary sex cords" EXACT [EHDAA2:0002011];;"testis primitive sex cord" RELATED [] | ||
|union_of= | |||
|xref=EHDAA2:0002011;;EHDAA:8152;;EMAPA:29098;;VHOG:0001321 | |||
}} | }} |
Latest revision as of 17:52, 12 September 2014
Name: | testis sex cord | |
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Namespace: | FANTOM | |
Definition: | "The testis cords are precursors to the rete testis. They play several different roles in the development of the male genitals[WP]." [Wikipedia:Testis_cords] | |
Xrefs: |
| |
Synonyms: |
"primary sex cord" RELATED [] "testis cord" EXACT [MP:0006424] "testis primary sex cords" EXACT [EHDAA2:0002011] "testis primitive sex cord" RELATED [] | |
Comments: | check primary vs testis |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0004910(epithelium of male gonad),UBERON:0005295(sex cord) |
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develops_from: | UBERON:0010141(primitive sex cord of indifferent gonad) |
part_of: | UBERON:0000473(testis) |
Children
develops from: | UBERON:0001343 (seminiferous tubule of testis) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005297 (testis sex cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data