Personal tools

UBERON:0007284: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 13: Line 13:
|located_in=
|located_in=
|name=presumptive neural plate
|name=presumptive neural plate
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0004734
|part_of=UBERON:0004734

Latest revision as of 18:01, 12 September 2014

Name:presumptive neural plate
Namespace:FANTOM
Xrefs:
links:

EFO:0003424
TAO:0000063

ZFA:0000063

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0006598(presumptive structure),UBERON:0016879(future central nervous system)
develops_from:UBERON:0002346(neurectoderm)
part_of:UBERON:0004734(gastrula)



Children

develops from:UBERON:0003075 (neural plate)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007284 (presumptive neural plate), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "Region of the gastrula which gives rise to the neural plate.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.