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{{UBERON
{{UBERON
|id=UBERON:0009145
|alt_id=
|name=pharyngeal region
|namespace=
|def=
|xref=EMAPA:16549;;RETIRED_EHDAA2:0001454
|is_a=UBERON:0005423
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0009145
|is_a=UBERON:0005423
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=pharyngeal region of foregut
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001041;;UBERON:0001557
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=EMAPA:16549;;RETIRED_EHDAA2:0001454
}}
}}

Latest revision as of 18:05, 12 September 2014

Name:pharyngeal region of foregut
Namespace:FANTOM
Xrefs:
links:

EMAPA:16549

RETIRED_EHDAA2:0001454

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005423(developing anatomical structure)
part_of:UBERON:0001041(foregut),UBERON:0001557(upper respiratory tract)



Children

develops from:UBERON:0001042 (chordate pharynx)
part of:UBERON:0008814 (pharyngeal arch system)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009145 (pharyngeal region of foregut), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data