FFCP PHASE1:Hg19::chr10:11254721..11254723,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:11254721..11254723,+ | |||
|coexpression_cluster_id=C2979 | |||
|description=CAGE_peak_at_chr10:11254721..11254723,+ | |description=CAGE_peak_at_chr10:11254721..11254723,+ | ||
|id=chr10:11254721..11254723,+ | |id=chr10:11254721..11254723,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.90e-30!172;CL:0000566!2.90e-30!172;CL:0002032!4.02e-28!165;CL:0000837!4.02e-28!165;CL:0000988!8.91e-28!182;CL:0000738!2.48e-25!140;CL:0002087!8.23e-21!119;CL:0000542!6.57e-19!53;CL:0000051!6.57e-19!53;CL:0002031!1.50e-18!124;CL:0000838!1.72e-18!52;CL:0000084!2.85e-13!25;CL:0000827!2.85e-13!25;CL:0000791!1.44e-12!18;CL:0000789!1.44e-12!18;CL:0002420!1.44e-12!18;CL:0002419!1.44e-12!18;CL:0000790!1.44e-12!18;CL:0000763!3.26e-11!112;CL:0000049!3.26e-11!112;CL:0000625!2.60e-07!11;CL:0000766!3.85e-07!76 | |ontology_enrichment_celltype=CL:0000037!2.90e-30!172;CL:0000566!2.90e-30!172;CL:0002032!4.02e-28!165;CL:0000837!4.02e-28!165;CL:0000988!8.91e-28!182;CL:0000738!2.48e-25!140;CL:0002087!8.23e-21!119;CL:0000542!6.57e-19!53;CL:0000051!6.57e-19!53;CL:0002031!1.50e-18!124;CL:0000838!1.72e-18!52;CL:0000084!2.85e-13!25;CL:0000827!2.85e-13!25;CL:0000791!1.44e-12!18;CL:0000789!1.44e-12!18;CL:0002420!1.44e-12!18;CL:0002419!1.44e-12!18;CL:0000790!1.44e-12!18;CL:0000763!3.26e-11!112;CL:0000049!3.26e-11!112;CL:0000625!2.60e-07!11;CL:0000766!3.85e-07!76 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;1.35e-13;18!CL:0000789;1.35e-13;18!CL:0002419;1.35e-13;18!CL:0000624;3.32e-11;6!CL:0000084;4.01e-11;25!CL:0000875;2.08e-09;3!CL:0002396;2.08e-09;3!CL:0000542;2.62e-09;53!CL:0000236;3.49e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.77e-14,52;CL:0000542,4.11e-14,53;CL:0000051,4.11e-14,53;CL:0000791,8.94e-14,18;CL:0000789,8.94e-14,18;CL:0002420,8.94e-14,18;CL:0002419,8.94e-14,18;CL:0000790,8.94e-14,18;CL:0000738,1.85e-13,136;CL:0000037,5.72e-13,168;CL:0000988,7.64e-12,177;CL:0002087,2.36e-11,115;CL:0000624,2.76e-11,6;CL:0000084,3.64e-11,25;CL:0000827,3.64e-11,25;CL:0002032,4.74e-11,161;CL:0000837,4.74e-11,161;CL:0002393,2.20e-10,9;CL:0002397,2.20e-10,9;CL:0000875,2.10e-09,3;CL:0002396,2.10e-09,3;CL:0002031,1.11e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.35e-13;18!CL:0000051;2.62e-09;53 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-15!115;UBERON:0002390!1.13e-09!102;UBERON:0003061!1.13e-09!102;UBERON:0002020!4.63e-09!34;UBERON:0003528!4.63e-09!34;UBERON:0001893!5.69e-09!34;UBERON:0002791!9.91e-09!33;UBERON:0000178!1.48e-08!15;UBERON:0000179!1.48e-08!15;UBERON:0000463!1.48e-08!15;UBERON:0001869!2.13e-08!32;UBERON:0002193!2.43e-08!112;UBERON:0002619!5.02e-08!22;UBERON:0001049!5.46e-08!57;UBERON:0005068!5.46e-08!57;UBERON:0006241!5.46e-08!57;UBERON:0007135!5.46e-08!57;UBERON:0002780!1.22e-07!41;UBERON:0001890!1.22e-07!41;UBERON:0006240!1.22e-07!41;UBERON:0003080!2.85e-07!42;UBERON:0001950!5.50e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.30e-16;15!UBERON:0000179;1.30e-16;15!UBERON:0000463;1.30e-16;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.24e-17,15;UBERON:0000179,8.24e-17,15;UBERON:0000463,8.24e-17,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.314843125254717,0,2.30297638858328,0.309632246632152,0,0,0,0,0,0.587200878669695,0,0.802177789880567,0.868043482863407,0.223915474239924,0.32389366601898,0.77272670290256,0.290796477559129,0.377875943688809,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0.564727018627814,0.272906150057846,0.224723484445085,0,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0.502497330513487,0.521482918420201,0,0,0,0,1.69004229049553,1.27562579979026,1.04829322754188,2.47122988522289,0.901061357049038,0.64290234678832,5.70025487482497,2.78483348078726,1.27864907635244,3.51992488922645,2.73069305631066,1.77901850772711,2.98711155796555,0.400395987036012,1.14950487990897,0,0.954053754535364,1.1384259382189,0,0.382273228125229,1.32171328579026,1.12101712596307,1.05353633910031,1.57367816091066,5.50215067848831,1.64481199199607,0.83593247695339,0.977766799900771,0.946895611469467,1.94826728407911,0.334231370655521,1.47302953737419,0.443067789167242,0,1.15282187753108,1.69077151827842,1.47994114143309,1.93445012450094,1.44901542867526,1.33457906845854,0.802622484269139,3.1360657141493,1.35971211237079,1.14966148080576,1.37450978193052,1.51811815211702,1.59282707162048,2.60433381542567,0.950452044448374,0.451725357233318,0.127986611154418,0,2.60454977248419,0.821127996921047,0.604820229674197,2.94184215361858,2.46201486600758,0,0,0,0.722878304769133,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,3.87780264148325,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880484340132261,0.207328115540772,0.864719720501769,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0.197030760201927,1.72502059887614,2.69520376187472,0,1.30139853857622,0,0,0,2.24702107184155,8.97484377612075,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,1.72571360654893,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,1.52927441428475,2.27858874869665,2.38231775457789,1.64544909234478,1.94541993357815,1.08006287447623,2.37937552888281,0,0,0,0.371606350251437,0.144269212976445,0.355709216742071,0,0.59873811429845,0.766021480529467,0.423347165447766,0.324621940274555,2.24637742490767,3.19528550646469,0,2.50634477090067,0.169291777801603,0.321176150207399,0.201799707191048,0.425846237690326,0.343505344755765,0.307240764308458,0.223676107892416,0.166849141711909,0.390776190804081,0,0,0.811367035427949,0,1.4098700508785,0,0.146508179271894,0.606802608747567,0.557216921387392,0,0,0,0,0,0.703347082052564,0.111308705022906,0.659215496907038,0,0.19924798825107,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,2.3948309234694,0,1.93866549219044,0.0927680981618513,3.99227596002388,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0.552896299656123,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0.941881538370149,0.332423363800313,0,0,0,0,0.317873157960757,0,0,0,0,0.995261931078505,0.176915129006678,1.22206028986725,0.296521128680622,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,1.22429104652196,0.63186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.316553979779393,0.195551382734803,0,0.426905989478705,0,0,0.343609788497747,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,1.05154941711726,0.279282401272254,0.916641696046735,1.43574604915363,0.199679000498991,0,0,0.335917362433631,0.720599767084807,0,0,0,0,0,0.169346664131569,0.795229689809303,0.544813624446302,0,0,0,0,0,0.364497339948148,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0.427149650270779,0.628817220398664,1.65695622138878,0.496166021811951,0.395223263795889,0,0,1.63205341010842,0.2506898940227,0.919036730290385,0.327872630709804,0.157054096250234,0,0,0.250381861413,0.573409195690071,0.443716206147409,0.248385611765534,0,0,0,0.285465333544967,0,0,0,0,0.233713309847224,0,0,0,0,0,0.302461847526478,0.15543720058278,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.389720617678777,0.797189041880179,0.654261577023377,0,0,0,0.39997479170986,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0,0,0,0.23658523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| ||
|short_description=p@chr10:11254721..11254723,+ | |short_description=p@chr10:11254721..11254723,+ | ||
}} | }} |
Latest revision as of 10:25, 23 July 2015
Short description: | p@chr10:11254721..11254723, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:11254721..11254723, + |
Coexpression cluster: | C2979_Neutrophils_parietal_brain_occipital_CD4_CD14CD16_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.77e-14 | 52 |
lymphocyte | 4.11e-14 | 53 |
common lymphoid progenitor | 4.11e-14 | 53 |
mature alpha-beta T cell | 8.94e-14 | 18 |
alpha-beta T cell | 8.94e-14 | 18 |
immature T cell | 8.94e-14 | 18 |
mature T cell | 8.94e-14 | 18 |
immature alpha-beta T cell | 8.94e-14 | 18 |
leukocyte | 1.85e-13 | 136 |
hematopoietic stem cell | 5.72e-13 | 168 |
hematopoietic cell | 7.64e-12 | 177 |
nongranular leukocyte | 2.36e-11 | 115 |
CD4-positive, alpha-beta T cell | 2.76e-11 | 6 |
T cell | 3.64e-11 | 25 |
pro-T cell | 3.64e-11 | 25 |
hematopoietic oligopotent progenitor cell | 4.74e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.74e-11 | 161 |
intermediate monocyte | 2.20e-10 | 9 |
CD14-positive, CD16-positive monocyte | 2.20e-10 | 9 |
non-classical monocyte | 2.10e-09 | 3 |
CD14-low, CD16-positive monocyte | 2.10e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 1.11e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 8.24e-17 | 15 |
haemolymphatic fluid | 8.24e-17 | 15 |
organism substance | 8.24e-17 | 15 |