FFCP PHASE1:Hg19::chr10:123873239..123873244,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:123873239..123873244,- to FFCP PHASE1:Hg19::chr10:123873239..123873244,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:123873239..123873244,- | |||
|description=CAGE_peak_at_chr10:123873239..123873244,- | |||
|id=chr10:123873239..123873244,- | |||
|ontology_enrichment_celltype=CL:0002139!2.40e-08!24;CL:0000071!2.67e-08!18;CL:0002546!2.67e-08!18;CL:0000115!5.48e-07!35;CL:0000066!6.44e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.87e-11;36!CL:1000413;3.01e-10;9!CL:0000071;7.17e-10;18!CL:0002139;7.20e-10;24!CL:0002544;3.16e-08;6!CL:0002078;1.89e-07;45!CL:0002328;9.29e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.01e-12,36;CL:1000413,1.38e-10,9;CL:0002078,2.54e-10,45;CL:0000071,4.47e-10,18;CL:0002546,4.47e-10,18;CL:0002139,5.90e-10,24;CL:0002544,1.86e-08,6;CL:0000213,5.00e-07,58;CL:0000215,5.00e-07,58;CL:0002328,8.03e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;7.17e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.82e-17!241;UBERON:0000477!3.08e-16!286;UBERON:0000025!1.61e-14!194;UBERON:0003914!7.27e-14!118;UBERON:0000119!1.65e-13!312;UBERON:0000483!2.59e-13!309;UBERON:0000467!9.36e-11!625;UBERON:0000480!1.36e-10!626;UBERON:0000468!2.28e-10!659;UBERON:0000481!6.67e-10!347;UBERON:0000466!1.23e-09!126;UBERON:0004872!1.72e-09!84;UBERON:0000055!2.69e-09!69;UBERON:0001981!3.46e-09!60;UBERON:0007500!3.46e-09!60;UBERON:0004537!3.46e-09!60;UBERON:0006965!3.46e-09!60;UBERON:0001986!2.67e-08!18;UBERON:0004638!2.67e-08!18;UBERON:0004852!2.67e-08!18;UBERON:0000490!3.07e-08!138;UBERON:0004119!6.18e-08!169;UBERON:0000925!6.18e-08!169;UBERON:0006595!6.18e-08!169;UBERON:0000464!8.86e-08!104;UBERON:0000922!1.28e-07!612;UBERON:0000923!1.44e-07!604;UBERON:0005291!1.44e-07!604;UBERON:0006598!1.44e-07!604;UBERON:0002532!1.44e-07!604;UBERON:0001007!1.69e-07!155;UBERON:0001555!1.69e-07!155;UBERON:0007026!1.69e-07!155;UBERON:0005177!1.70e-07!107;UBERON:0002050!1.95e-07!605;UBERON:0005423!1.95e-07!605;UBERON:0003104!4.07e-07!238;UBERON:0009142!4.07e-07!238;UBERON:0000926!4.14e-07!448;UBERON:0004120!4.14e-07!448;UBERON:0006603!4.14e-07!448;UBERON:0002049!5.12e-07!79;UBERON:0007798!5.12e-07!79;UBERON:0001048!5.82e-07!168;UBERON:0006914!9.32e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;3.01e-10;9!UBERON:0004700;3.01e-10;9!UBERON:0001917;3.01e-10;9!UBERON:0004638;7.17e-10;18!UBERON:0001986;7.17e-10;18!UBERON:0004852;7.17e-10;18!UBERON:0000490;8.12e-09;33!UBERON:0006914;7.37e-08;25!UBERON:0000487;1.11e-07;22!UBERON:0004815;9.29e-07;3!UBERON:0002031;9.29e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,1.38e-10,9;UBERON:0004700,1.38e-10,9;UBERON:0001917,1.38e-10,9;UBERON:0004638,4.47e-10,18;UBERON:0001986,4.47e-10,18;UBERON:0004852,4.47e-10,18;UBERON:0004111,4.52e-09,240;UBERON:0003914,1.14e-08,117;UBERON:0006914,4.73e-08,25;UBERON:0000487,7.66e-08,22;UBERON:0000025,1.86e-07,192;UBERON:0009569,3.66e-07,112;UBERON:0000055,4.86e-07,68;UBERON:0007500,5.34e-07,59;UBERON:0001981,5.34e-07,59;UBERON:0004537,5.34e-07,59;UBERON:0006965,5.34e-07,59;UBERON:0004815,8.03e-07,3;UBERON:0002031,8.03e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.522371256399677,0.737201809504527,0,0,0,1.60896258848061,0.662794751455832,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0.204000691244253,0.313454721478088,0.286235987131057,0.273748850145768,0,0,0.0821005894499457,0,0,0,0,3.67768489791571,1.8072355126695,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,3.40644409211845,0,0.221729397462564,0.087834785693126,0.130979075497713,0.728590576585084,0,0,0,0,0,0,0,1.98762407366705,5.16140757063675,1.04142150482278,1.69592382577203,0.419499436209906,1.92582629358047,3.34391946458897,1.29208379584664,0.71153252537342,1.00416183829401,0,0.760272105718513,0.488124115096339,1.47065232138347,0.81014194788176,0.17859945656816,0.898117490504679,0.112611480483322,13.7984973719295,4.74632829784064,2.19842092716489,0,0,0.436094052142534,0,0.379891534993739,0.662045904066094,1.43418310374407,0,0.560677600142307,0,0.98667019366864,0,0,0.163461903113459,0.151357427644931,0,0,0,1.1409436430889,0.597794722207204,0.117434498643765,0,0.280901613404497,0,0.122834317311768,0.516628905878827,0,0,0.910161361938026,0,0.505008341862199,0.125118519871964,0,0,0,0.150238058906597,0.226864366320042,0,0.213557388818567,0,0.900273288253207,0.103052529238439,1.54584324027377,0,0,0,0,0,0.484938170456436,0.710019185033229,0.10075209822764,0.169560592310488,0.193260853163297,0,0.286804595389004,0,0,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.404493924480493,0,0,1.4763109092493,1.40241773803446,0,1.47008711385542,0,0,2.95394953340702,0,0.122988438543114,0,0.109750285408626,2.24803506515239,0.100528972411631,0.185176890317059,0.325808305310325,0,0,0,0,0,0.462985512576611,0,2.37061319387782,3.43394464837949,0,0,0,0,0,0,0.358234090811393,0,0.383382679165211,0,0,1.03664057770386,0.576479813667846,1.2624243342638,0,0.381988425558278,2.34434894420094,0,0,0,0,0.897048674762886,0,0.22001485746285,0,0,0.845302752556,0.26593811658487,0,0.514414748524284,0,0,0.142977993658148,0,0,0.325736184293735,1.06617584622764,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0,0.300946099727719,0,2.0694614258501,0,0.184369168541703,0.260650843404249,0.783204629850962,0,0,0,0,0.606255142892519,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0.308419387605311,0,0.246381468041427,0,0.464841513839837,1.0877350463246,0.200506470303285,0.368323955743585,0,0.182091168006717,0,0.451199612907412,0,0.784349769176855,1.46139224653261,0.105551628892876,3.4120015221269,2.04112446331819,0.215915916102139,1.54227252690289,0.541892875087706,1.00337954770971,0.254876273045038,0,0.447749509444357,0,0,0,0,0.325378394664303,3.709476419318,0,0.165018999841176,0,0,0,0.193341436584244,0.154048617114644,0.460511024178389,0,0,0,0.255679882248303,0.356128142586949,0.495854746082934,0.192190067365106,1.14851441245126,0.4046311234222,0,0,0,0.616067160352178,1.59691809095107,0,0.55597265731176,0.858749320451947,0,0,0,0.511795582622668,0,0.636406495851874,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0,0,1.13008116620243,0.551365343546124,0,0.438450885253763,0,1.31178950409327,0,0.92947049429925,0.281695602532241,0.430234056612155,0,0.7133421029625,0.709522128141196,1.47775344708365,0.658589785919804,0,0,0.384888450902048,3.35151137767894,0,2.35359501941948,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,5.01268954180134,0,0.1605880751037,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,2.24568648489864,1.75809815126273,0.121360521749513,0,0,0.71623345421307,0,0.614321404198464,0.994147647766298,0.140669416410513,0.222617410045812,0,0,2.78947183551498,0.276283915531148,0,0,0.861593638227486,0,0.0898683511473268,0.179021174675609,0,1.38100767891707,0,0,0,0.0927680981618513,0,0.260427761085233,0.262379999988587,1.44999915086959,0.227586896570999,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.442317039724898,0,0,0.10893846351899,0,0.769502585037971,0,0,0,0,1.27600463892768,0.0915975934018623,1.5991043280559,0,1.56980256395025,0.166211681900156,0,0,0,0,0.317873157960757,0,0.326465616318295,0.282706142867882,0,0,0.530745387020035,0.611030144933625,0.889563386041866,0,0,0.202203398942031,0.802577647298789,0,0,0.19566461893209,0,1.18375320854817,2.41981432097328,0,0.758238955541855,0,0,0.664653872707185,0.330991955875499,0,0,0,0.416024019039416,0.347119476670262,1.37189356380129,0.522355239482415,0.17472666824203,0.171986032471617,0.290268993867255,0.730893170861856,0.410577285266046,0.678923115418936,0.264768380074501,0.677942222341597,0,0.19871461170299,0,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| ||
|short_description=p@chr10:123873239..123873244,- | |||
}} | }} |
Latest revision as of 11:09, 23 July 2015
Short description: | p@chr10:123873239..123873244, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:123873239..123873244, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.01e-12 | 36 |
endothelial cell of artery | 1.38e-10 | 9 |
meso-epithelial cell | 2.54e-10 | 45 |
blood vessel endothelial cell | 4.47e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.47e-10 | 18 |
endothelial cell of vascular tree | 5.90e-10 | 24 |
aortic endothelial cell | 1.86e-08 | 6 |
lining cell | 5.00e-07 | 58 |
barrier cell | 5.00e-07 | 58 |
bronchial epithelial cell | 8.03e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 1.38e-10 | 9 |
arterial system endothelium | 1.38e-10 | 9 |
endothelium of artery | 1.38e-10 | 9 |
blood vessel endothelium | 4.47e-10 | 18 |
endothelium | 4.47e-10 | 18 |
cardiovascular system endothelium | 4.47e-10 | 18 |
anatomical conduit | 4.52e-09 | 240 |
epithelial tube | 1.14e-08 | 117 |
squamous epithelium | 4.73e-08 | 25 |
simple squamous epithelium | 7.66e-08 | 22 |
tube | 1.86e-07 | 192 |
subdivision of trunk | 3.66e-07 | 112 |
vessel | 4.86e-07 | 68 |
epithelial tube open at both ends | 5.34e-07 | 59 |
blood vessel | 5.34e-07 | 59 |
blood vasculature | 5.34e-07 | 59 |
vascular cord | 5.34e-07 | 59 |
lower respiratory tract epithelium | 8.03e-07 | 3 |
epithelium of bronchus | 8.03e-07 | 3 |