FFCP PHASE1:Hg19::chr10:126605254..126605281,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:126605254..126605281,-
|short_description=p@chr10:126605254..126605281,-
|description=CAGE_peak_at_chr10:126605254..126605281,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:126605254..126605281,- | |||
|description=CAGE_peak_at_chr10:126605254..126605281,- | |||
|id=chr10:126605254..126605281,- | |||
|ontology_enrichment_celltype=CL:0000838!3.81e-07!52;CL:0000542!6.06e-07!53;CL:0000051!6.06e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.73e-09;18!CL:0000789;5.73e-09;18!CL:0002419;5.73e-09;18!CL:0000084;3.13e-08;25!CL:0000624;5.00e-08;6!CL:0000542;8.15e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.27e-10,52;CL:0000542,5.26e-10,53;CL:0000051,5.26e-10,53;CL:0000791,2.45e-09,18;CL:0000789,2.45e-09,18;CL:0002420,2.45e-09,18;CL:0002419,2.45e-09,18;CL:0000790,2.45e-09,18;CL:0000084,2.53e-08,25;CL:0000827,2.53e-08,25;CL:0000624,4.18e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;5.73e-09;18!CL:0000051;8.15e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.03e-10!57;UBERON:0005068!4.03e-10!57;UBERON:0006241!4.03e-10!57;UBERON:0007135!4.03e-10!57;UBERON:0002616!2.75e-09!59;UBERON:0000955!9.90e-09!69;UBERON:0006238!9.90e-09!69;UBERON:0001017!1.75e-08!82;UBERON:0000073!2.80e-08!94;UBERON:0001016!2.80e-08!94;UBERON:0005743!3.29e-08!86;UBERON:0003080!1.95e-07!42;UBERON:0002780!4.28e-07!41;UBERON:0001890!4.28e-07!41;UBERON:0006240!4.28e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.39e-07,56;UBERON:0005068,1.39e-07,56;UBERON:0006241,1.39e-07,56;UBERON:0007135,1.39e-07,56;UBERON:0001017,5.18e-07,81;UBERON:0000073,6.44e-07,53;UBERON:0002616,6.44e-07,53 | |||
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| ||
|short_description=p@chr10:126605254..126605281,- | |||
}} | }} |
Latest revision as of 11:24, 23 July 2015
Short description: | p@chr10:126605254..126605281, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:126605254..126605281, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.27e-10 | 52 |
lymphocyte | 5.26e-10 | 53 |
common lymphoid progenitor | 5.26e-10 | 53 |
mature alpha-beta T cell | 2.45e-09 | 18 |
alpha-beta T cell | 2.45e-09 | 18 |
immature T cell | 2.45e-09 | 18 |
mature T cell | 2.45e-09 | 18 |
immature alpha-beta T cell | 2.45e-09 | 18 |
T cell | 2.53e-08 | 25 |
pro-T cell | 2.53e-08 | 25 |
CD4-positive, alpha-beta T cell | 4.18e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.39e-07 | 56 |
neural rod | 1.39e-07 | 56 |
future spinal cord | 1.39e-07 | 56 |
neural keel | 1.39e-07 | 56 |
central nervous system | 5.18e-07 | 81 |
regional part of nervous system | 6.44e-07 | 53 |
regional part of brain | 6.44e-07 | 53 |