FFCP PHASE1:Hg19::chr10:127763979..127763984,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:127763979..127763984,+ | |||
|coexpression_cluster_id=C1109 | |coexpression_cluster_id=C1109 | ||
|description=CAGE_peak_at_chr10:127763979..127763984,+ | |description=CAGE_peak_at_chr10:127763979..127763984,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000244!5.02e-21!4;CL:0000731!5.02e-21!4;CL:0002166!4.67e-16!3;CL:0002621!4.70e-15!3;CL:0000066!5.54e-15!254;CL:0002076!1.25e-13!43;CL:0002159!2.48e-13!13;CL:0000223!2.79e-09!59;CL:0002368!3.50e-09!13;CL:0002592!1.99e-07!3 | |ontology_enrichment_celltype=CL:0000244!5.02e-21!4;CL:0000731!5.02e-21!4;CL:0002166!4.67e-16!3;CL:0002621!4.70e-15!3;CL:0000066!5.54e-15!254;CL:0002076!1.25e-13!43;CL:0002159!2.48e-13!13;CL:0000223!2.79e-09!59;CL:0002368!3.50e-09!13;CL:0002592!1.99e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000244;2.27e-61;4!CL:0000731;2.27e-61;4!CL:0002166;1.43e-21;3!CL:0002159;1.73e-10;14 | |ontology_enrichment_celltype_v019=CL:0000244;2.27e-61;4!CL:0000731;2.27e-61;4!CL:0002166;1.43e-21;3!CL:0002159;1.73e-10;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.67e-61,4;CL:0000731,1.67e-61,4;CL:0002166,1.43e-21,3;CL:0002159,1.84e-10,14;CL:0000066,1.36e-07,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!2.53e-08!14 | |ontology_enrichment_disease=DOID:1749!2.53e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:4929;6.93e-09;2 | |ontology_enrichment_disease_v019=DOID:4929;6.93e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4929,5.49e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000365!7.60e-17!5;UBERON:0001949!4.70e-15!3;UBERON:0005910!4.71e-14!6;UBERON:0001708!3.67e-12!4;UBERON:0001704!3.67e-12!4;UBERON:0002090!3.01e-08!6;UBERON:0001621!1.99e-07!3 | |ontology_enrichment_uberon=UBERON:0000365!7.60e-17!5;UBERON:0001949!4.70e-15!3;UBERON:0005910!4.71e-14!6;UBERON:0001708!3.67e-12!4;UBERON:0001704!3.67e-12!4;UBERON:0002090!3.01e-08!6;UBERON:0001621!1.99e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.21e-49;5!UBERON:0005910;4.11e-41;6!UBERON:0000486;8.55e-21;12!UBERON:0004913;1.93e-16;1!UBERON:0003703;1.93e-16;1!UBERON:0001174;1.93e-16;1!UBERON:0004914;1.93e-16;1!UBERON:0001708;1.93e-16;4!UBERON:0008895;1.93e-16;4!UBERON:0011159;2.37e-13;5!UBERON:0006554;1.67e-08;30!UBERON:0001008;1.67e-08;30!UBERON:0005911;4.97e-07;36 | |ontology_enrichment_uberon_v019=UBERON:0000365;3.21e-49;5!UBERON:0005910;4.11e-41;6!UBERON:0000486;8.55e-21;12!UBERON:0004913;1.93e-16;1!UBERON:0003703;1.93e-16;1!UBERON:0001174;1.93e-16;1!UBERON:0004914;1.93e-16;1!UBERON:0001708;1.93e-16;4!UBERON:0008895;1.93e-16;4!UBERON:0011159;2.37e-13;5!UBERON:0006554;1.67e-08;30!UBERON:0001008;1.67e-08;30!UBERON:0005911;4.97e-07;36 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.51e-49,5;UBERON:0005910,3.35e-41,6;UBERON:0004913,1.21e-16,1;UBERON:0003703,1.21e-16,1;UBERON:0001174,1.21e-16,1;UBERON:0004914,1.21e-16,1;UBERON:0001708,1.93e-16,4;UBERON:0008895,1.93e-16,4;UBERON:0011159,2.37e-13,5;UBERON:0010188,2.76e-11,6;UBERON:0002539,2.76e-11,6;UBERON:0008816,2.76e-11,6;UBERON:0005911,9.39e-09,82;UBERON:0006554,3.18e-08,47;UBERON:0001008,4.73e-08,48 | |||
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|short_description=p@chr10:127763979..127763984,+ | |short_description=p@chr10:127763979..127763984,+ | ||
}} | }} |
Latest revision as of 11:29, 23 July 2015
Short description: | p@chr10:127763979..127763984, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:127763979..127763984, + |
Coexpression cluster: | C1109_Urothelial_Small_Gingival_Mallassezderived_Prostate_Sebocyte_Bronchial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.67e-61 | 4 |
urothelial cell | 1.67e-61 | 4 |
epithelial cell of Malassez | 1.43e-21 | 3 |
general ecto-epithelial cell | 1.84e-10 | 14 |
epithelial cell | 1.36e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.51e-49 | 5 |
transitional epithelium | 3.35e-41 | 6 |
hepatopancreatic ampulla | 1.21e-16 | 1 |
extrahepatic bile duct | 1.21e-16 | 1 |
common bile duct | 1.21e-16 | 1 |
duodenal papilla | 1.21e-16 | 1 |
jaw skeleton | 1.93e-16 | 4 |
splanchnocranium | 1.93e-16 | 4 |
primary subdivision of cranial skeletal system | 2.37e-13 | 5 |
protuberance | 2.76e-11 | 6 |
pharyngeal arch | 2.76e-11 | 6 |
embryonic head | 2.76e-11 | 6 |
endo-epithelium | 9.39e-09 | 82 |
urinary system structure | 3.18e-08 | 47 |
renal system | 4.73e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 5.49e-09 | 2 |