FFCP PHASE1:Hg19::chr10:129979342..129979357,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_uc001lkg.1_5end | |association_with_transcript=-42bp_to_uc001lkg.1_5end | ||
|cluster_id=chr10:129979342..129979357,+ | |||
|coexpression_cluster_id=C974 | |||
|description=CAGE_peak_2_at_uc001lkg.1_5end | |description=CAGE_peak_2_at_uc001lkg.1_5end | ||
|id=chr10:129979342..129979357,+ | |id=chr10:129979342..129979357,+ | ||
|ontology_enrichment_celltype=CL:0000084!4.63e-34!25;CL:0000827!4.63e-34!25;CL:0000791!1.22e-27!18;CL:0000789!1.22e-27!18;CL:0002420!1.22e-27!18;CL:0002419!1.22e-27!18;CL:0000790!1.22e-27!18;CL:0000838!1.43e-22!52;CL:0000542!4.84e-22!53;CL:0000051!4.84e-22!53;CL:0000738!1.21e-15!140;CL:0000625!1.77e-13!11;CL:0000624!1.99e-13!6;CL:0000037!2.52e-13!172;CL:0000566!2.52e-13!172;CL:0000988!3.78e-12!182;CL:0002087!1.06e-11!119;CL:0000784!4.27e-11!3;CL:0000623!9.56e-11!3;CL:0000825!9.56e-11!3;CL:0000767!5.37e-10!3;CL:0000842!8.12e-10!3;CL:0002032!2.24e-08!165;CL:0000837!2.24e-08!165;CL:0002031!4.01e-08!124;CL:0000893!1.15e-07!2;CL:0002489!1.15e-07!2;CL:0000809!1.15e-07!2;CL:0000808!1.15e-07!2;CL:0000894!1.15e-07!2;CL:0000806!1.15e-07!2;CL:0000807!1.15e-07!2;CL:0000805!1.15e-07!2;CL:0002425!1.15e-07!2;CL:0000224!1.80e-07!4 | |ontology_enrichment_celltype=CL:0000084!4.63e-34!25;CL:0000827!4.63e-34!25;CL:0000791!1.22e-27!18;CL:0000789!1.22e-27!18;CL:0002420!1.22e-27!18;CL:0002419!1.22e-27!18;CL:0000790!1.22e-27!18;CL:0000838!1.43e-22!52;CL:0000542!4.84e-22!53;CL:0000051!4.84e-22!53;CL:0000738!1.21e-15!140;CL:0000625!1.77e-13!11;CL:0000624!1.99e-13!6;CL:0000037!2.52e-13!172;CL:0000566!2.52e-13!172;CL:0000988!3.78e-12!182;CL:0002087!1.06e-11!119;CL:0000784!4.27e-11!3;CL:0000623!9.56e-11!3;CL:0000825!9.56e-11!3;CL:0000767!5.37e-10!3;CL:0000842!8.12e-10!3;CL:0002032!2.24e-08!165;CL:0000837!2.24e-08!165;CL:0002031!4.01e-08!124;CL:0000893!1.15e-07!2;CL:0002489!1.15e-07!2;CL:0000809!1.15e-07!2;CL:0000808!1.15e-07!2;CL:0000894!1.15e-07!2;CL:0000806!1.15e-07!2;CL:0000807!1.15e-07!2;CL:0000805!1.15e-07!2;CL:0002425!1.15e-07!2;CL:0000224!1.80e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000784;8.59e-12;3!CL:0002127;2.55e-09;1!CL:0000911;2.55e-09;1!CL:0000814;2.55e-09;1!CL:0000084;7.27e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,9.83e-12,3;CL:0002127,2.35e-09,1;CL:0000914,2.35e-09,1;CL:0000911,2.35e-09,1;CL:0000814,2.35e-09,1;CL:0002042,2.35e-09,1;CL:0002039,2.35e-09,1;CL:0002040,2.35e-09,1;CL:0002041,2.35e-09,1;CL:0000084,7.43e-08,25;CL:0000827,7.43e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.46e-14!4;UBERON:0005058!3.46e-14!4;UBERON:0009113!3.46e-14!4;UBERON:0003295!3.46e-14!4;UBERON:0005562!3.46e-14!4;UBERON:0004177!5.65e-12!7;UBERON:0003351!1.84e-09!6 | |ontology_enrichment_uberon=UBERON:0002370!3.46e-14!4;UBERON:0005058!3.46e-14!4;UBERON:0009113!3.46e-14!4;UBERON:0003295!3.46e-14!4;UBERON:0005562!3.46e-14!4;UBERON:0004177!5.65e-12!7;UBERON:0003351!1.84e-09!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.24e-17;2!UBERON:0005058;3.24e-17;2!UBERON:0009113;3.24e-17;2!UBERON:0004177;2.04e-07;5!UBERON:0005057;2.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.07e-18,4;UBERON:0005058,1.07e-18,4;UBERON:0009113,1.07e-18,4;UBERON:0003295,1.07e-18,4;UBERON:0005562,1.07e-18,4;UBERON:0003351,1.16e-12,6;UBERON:0004177,6.29e-11,7;UBERON:0005057,6.29e-11,7;UBERON:0000974,8.54e-08,10;UBERON:0003408,8.54e-08,10;UBERON:0001042,8.54e-08,10;UBERON:0009145,8.54e-08,10;UBERON:0006562,3.98e-07,11;UBERON:0009722,3.98e-07,11;UBERON:0007690,3.98e-07,11 | |||
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| ||
|short_description=p2@uc001lkg.1 | |short_description=p2@uc001lkg.1 | ||
}} | }} |
Latest revision as of 11:39, 23 July 2015
Short description: | p2@uc001lkg.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc001lkg.1_5end |
Coexpression cluster: | C974_Dendritic_CD8_CD4_Natural_NK_B_Basophils |
Association with transcript: | -42bp_to_uc001lkg.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 9.83e-12 | 3 |
innate effector T cell | 2.35e-09 | 1 |
immature NK T cell | 2.35e-09 | 1 |
effector T cell | 2.35e-09 | 1 |
mature NK T cell | 2.35e-09 | 1 |
immature NK T cell stage IV | 2.35e-09 | 1 |
immature NK T cell stage I | 2.35e-09 | 1 |
immature NK T cell stage II | 2.35e-09 | 1 |
immature NK T cell stage III | 2.35e-09 | 1 |
T cell | 7.43e-08 | 25 |
pro-T cell | 7.43e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.07e-18 | 4 |
hemolymphoid system gland | 1.07e-18 | 4 |
thymic region | 1.07e-18 | 4 |
pharyngeal gland | 1.07e-18 | 4 |
thymus primordium | 1.07e-18 | 4 |
pharyngeal epithelium | 1.16e-12 | 6 |
hemopoietic organ | 6.29e-11 | 7 |
immune organ | 6.29e-11 | 7 |
neck | 8.54e-08 | 10 |
gland of gut | 8.54e-08 | 10 |
chordate pharynx | 8.54e-08 | 10 |
pharyngeal region of foregut | 8.54e-08 | 10 |
pharynx | 3.98e-07 | 11 |
entire pharyngeal arch endoderm | 3.98e-07 | 11 |
early pharyngeal endoderm | 3.98e-07 | 11 |