FFCP PHASE1:Hg19::chr10:13341694..13341705,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:13341694..13341705,+ | |||
|description=CAGE_peak_at_chr10:13341694..13341705,+ | |description=CAGE_peak_at_chr10:13341694..13341705,+ | ||
|id=chr10:13341694..13341705,+ | |id=chr10:13341694..13341705,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.36e-13!45;CL:0002057!2.82e-12!42;CL:0002393!3.04e-12!9;CL:0002397!3.04e-12!9;CL:0000766!1.48e-09!76;CL:0000839!1.82e-09!70;CL:0000557!3.37e-09!71;CL:0002194!9.07e-08!63;CL:0000576!9.07e-08!63;CL:0000040!9.07e-08!63;CL:0000559!9.07e-08!63;CL:0002009!2.73e-07!65;CL:0000738!6.57e-07!140 | |ontology_enrichment_celltype=CL:0000860!1.36e-13!45;CL:0002057!2.82e-12!42;CL:0002393!3.04e-12!9;CL:0002397!3.04e-12!9;CL:0000766!1.48e-09!76;CL:0000839!1.82e-09!70;CL:0000557!3.37e-09!71;CL:0002194!9.07e-08!63;CL:0000576!9.07e-08!63;CL:0000040!9.07e-08!63;CL:0000559!9.07e-08!63;CL:0002009!2.73e-07!65;CL:0000738!6.57e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.34e-30;5!CL:0000037;9.48e-18;1!CL:0001024;9.48e-18;1!CL:0000163;2.46e-17;9!CL:0002393;6.34e-12;6!CL:0002397;6.34e-12;6!CL:0000875;8.86e-07;3!CL:0002396;8.86e-07;3 | |ontology_enrichment_celltype_v019=CL:0000097;1.34e-30;5!CL:0000037;9.48e-18;1!CL:0001024;9.48e-18;1!CL:0000163;2.46e-17;9!CL:0002393;6.34e-12;6!CL:0002397;6.34e-12;6!CL:0000875;8.86e-07;3!CL:0002396;8.86e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.28e-30,5;CL:0002028,1.28e-30,5;CL:0001024,1.03e-17,1;CL:0000163,2.40e-17,9;CL:0002393,5.80e-17,9;CL:0002397,5.80e-17,9;CL:0000839,1.08e-08,66;CL:0000557,1.46e-08,67;CL:0000766,5.88e-08,72;CL:0000875,7.70e-07,3;CL:0002396,7.70e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.11e-23;3 | |ontology_enrichment_development_v019=UBERON:0006215;4.11e-23;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.59e-08!80;UBERON:0000073!2.33e-07!94;UBERON:0001016!2.33e-07!94;UBERON:0001017!5.69e-07!82;UBERON:0005743!9.16e-07!86 | |ontology_enrichment_uberon=UBERON:0002371!6.59e-08!80;UBERON:0000073!2.33e-07!94;UBERON:0001016!2.33e-07!94;UBERON:0001017!5.69e-07!82;UBERON:0005743!9.16e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.55e-12;6!UBERON:0002680;2.37e-08;9!UBERON:0001895;2.37e-08;9 | |ontology_enrichment_uberon_v019=UBERON:0002037;4.55e-12;6!UBERON:0002680;2.37e-08;9!UBERON:0001895;2.37e-08;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.81e-12,6;UBERON:0006215,4.81e-12,6;UBERON:0002371,4.08e-10,76;UBERON:0001474,2.36e-09,82;UBERON:0004765,1.72e-08,90;UBERON:0002680,2.46e-08,9;UBERON:0001895,2.46e-08,9;UBERON:0010092,2.46e-08,9;UBERON:0002405,3.31e-08,93;UBERON:0002390,9.08e-08,98;UBERON:0003061,9.08e-08,98;UBERON:0001434,1.32e-07,100;UBERON:0002193,5.19e-07,108 | |||
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| ||
|short_description=p@chr10:13341694..13341705,+ | |short_description=p@chr10:13341694..13341705,+ | ||
}} | }} |
Latest revision as of 11:42, 23 July 2015
Short description: | p@chr10:13341694..13341705, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:13341694..13341705, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.28e-30 | 5 |
basophil mast progenitor cell | 1.28e-30 | 5 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.03e-17 | 1 |
endocrine cell | 2.40e-17 | 9 |
intermediate monocyte | 5.80e-17 | 9 |
CD14-positive, CD16-positive monocyte | 5.80e-17 | 9 |
myeloid lineage restricted progenitor cell | 1.08e-08 | 66 |
granulocyte monocyte progenitor cell | 1.46e-08 | 67 |
myeloid leukocyte | 5.88e-08 | 72 |
non-classical monocyte | 7.70e-07 | 3 |
CD14-low, CD16-positive monocyte | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.81e-12 | 6 |
rhombic lip | 4.81e-12 | 6 |
bone marrow | 4.08e-10 | 76 |
bone element | 2.36e-09 | 82 |
skeletal element | 1.72e-08 | 90 |
regional part of metencephalon | 2.46e-08 | 9 |
metencephalon | 2.46e-08 | 9 |
future metencephalon | 2.46e-08 | 9 |
immune system | 3.31e-08 | 93 |
hematopoietic system | 9.08e-08 | 98 |
blood island | 9.08e-08 | 98 |
skeletal system | 1.32e-07 | 100 |
hemolymphoid system | 5.19e-07 | 108 |