FFCP PHASE1:Hg19::chr10:14083240..14083244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:14083240..14083244,- | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr10:14083240..14083244,- | |description=CAGE_peak_at_chr10:14083240..14083244,- | ||
|id=chr10:14083240..14083244,- | |id=chr10:14083240..14083244,- | ||
|ontology_enrichment_celltype=CL:0002057!1.82e-12!42;CL:0002594!1.07e-11!4;CL:0000860!1.72e-11!45;CL:0002595!1.25e-09!5;CL:0002194!6.33e-09!63;CL:0000576!6.33e-09!63;CL:0000040!6.33e-09!63;CL:0000559!6.33e-09!63;CL:0000359!7.57e-09!32;CL:0002009!1.39e-08!65;CL:0000839!8.22e-08!70;CL:0000557!1.14e-07!71;CL:0000766!5.07e-07!76 | |ontology_enrichment_celltype=CL:0002057!1.82e-12!42;CL:0002594!1.07e-11!4;CL:0000860!1.72e-11!45;CL:0002595!1.25e-09!5;CL:0002194!6.33e-09!63;CL:0000576!6.33e-09!63;CL:0000040!6.33e-09!63;CL:0000559!6.33e-09!63;CL:0000359!7.57e-09!32;CL:0002009!1.39e-08!65;CL:0000839!8.22e-08!70;CL:0000557!1.14e-07!71;CL:0000766!5.07e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0002591;5.05e-34;1!CL:1000306;1.12e-09;4!CL:0002547;1.12e-09;4!CL:0002393;8.48e-07;6!CL:0002397;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,5.05e-34,1;CL:1000306,1.12e-09,4;CL:0002547,1.12e-09,4;CL:0000860,8.72e-08,42;CL:0002057,8.72e-08,42;CL:0000473,6.78e-07,48;CL:0000234,6.78e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;7.82e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001310!1.07e-11!4;UBERON:0003834!1.25e-09!5;UBERON:0001533!1.25e-09!5;UBERON:0003081!6.84e-09!216;UBERON:0002204!1.77e-08!167;UBERON:0001637!3.17e-08!42;UBERON:0003509!3.17e-08!42;UBERON:0004572!3.17e-08!42;UBERON:0004872!2.25e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;9.07e-18;2!UBERON:0002012;9.07e-18;2!UBERON:0008886;9.07e-18;2!UBERON:0004797;1.12e-09;4!UBERON:0000415;1.12e-09;4!UBERON:0007240;1.12e-09;4!UBERON:0005742;1.12e-09;4!UBERON:0005734;1.12e-09;4!UBERON:0004664;1.12e-09;4!UBERON:0004663;1.12e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,9.07e-18,2;UBERON:0007497,9.07e-18,2;UBERON:0003643,9.07e-18,2;UBERON:0003504,9.07e-18,2;UBERON:0003469,9.07e-18,2;UBERON:0003496,9.07e-18,2;UBERON:0002012,9.07e-18,2;UBERON:0008886,9.07e-18,2;UBERON:0007303,9.07e-18,2;UBERON:0002061,9.07e-18,2;UBERON:0005432,9.07e-18,2;UBERON:0004363,9.07e-18,2;UBERON:0004145,2.59e-12,3;UBERON:0000415,1.12e-09,4;UBERON:0007240,1.12e-09,4;UBERON:0005742,1.12e-09,4;UBERON:0005734,1.12e-09,4;UBERON:0004664,1.12e-09,4;UBERON:0004663,1.12e-09,4;UBERON:0003498,6.55e-08,5;UBERON:0005985,6.55e-08,5;UBERON:0010188,8.48e-07,6;UBERON:0002539,8.48e-07,6;UBERON:0003351,8.48e-07,6;UBERON:0008816,8.48e-07,6 | |||
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|short_description=p@chr10:14083240..14083244,- | |short_description=p@chr10:14083240..14083244,- | ||
}} | }} |
Latest revision as of 11:59, 23 July 2015
Short description: | p@chr10:14083240..14083244, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:14083240..14083244, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 5.05e-34 | 1 |
fibroblast of tunica adventitia of artery | 1.12e-09 | 4 |
fibroblast of the aortic adventitia | 1.12e-09 | 4 |
classical monocyte | 8.72e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.72e-08 | 42 |
defensive cell | 6.78e-07 | 48 |
phagocyte | 6.78e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 9.07e-18 | 2 |
developing epithelial placode | 9.07e-18 | 2 |
respiratory system arterial blood vessel | 9.07e-18 | 2 |
respiratory system blood vessel | 9.07e-18 | 2 |
respiratory system artery | 9.07e-18 | 2 |
head blood vessel | 9.07e-18 | 2 |
pulmonary artery | 9.07e-18 | 2 |
pulmonary vascular system | 9.07e-18 | 2 |
pharyngeal vasculature | 9.07e-18 | 2 |
truncus arteriosus | 9.07e-18 | 2 |
aortic sac | 9.07e-18 | 2 |
pharyngeal arch artery | 9.07e-18 | 2 |
outflow tract | 2.59e-12 | 3 |
artery wall | 1.12e-09 | 4 |
tunica adventitia of artery | 1.12e-09 | 4 |
adventitia | 1.12e-09 | 4 |
tunica adventitia of blood vessel | 1.12e-09 | 4 |
aorta tunica adventitia | 1.12e-09 | 4 |
aorta wall | 1.12e-09 | 4 |
heart blood vessel | 6.55e-08 | 5 |
coronary vessel | 6.55e-08 | 5 |
protuberance | 8.48e-07 | 6 |
pharyngeal arch | 8.48e-07 | 6 |
pharyngeal epithelium | 8.48e-07 | 6 |
embryonic head | 8.48e-07 | 6 |