FFCP PHASE1:Hg19::chr10:22540834..22540841,-: Difference between revisions
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|id=chr10:22540834..22540841,-
|short_description=p@chr10:22540834..22540841,-
|description=CAGE_peak_at_chr10:22540834..22540841,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:22540834..22540841,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr10:22540834..22540841,- | |||
|id=chr10:22540834..22540841,- | |||
|ontology_enrichment_celltype=CL:0002057!2.88e-30!42;CL:0000860!4.54e-28!45;CL:0000839!1.63e-19!70;CL:0000557!3.34e-19!71;CL:0002194!6.23e-19!63;CL:0000576!6.23e-19!63;CL:0000040!6.23e-19!63;CL:0000559!6.23e-19!63;CL:0002009!2.82e-18!65;CL:0000766!9.17e-18!76;CL:0000763!1.29e-16!112;CL:0000049!1.29e-16!112;CL:0002031!9.54e-15!124;CL:0002032!1.32e-14!165;CL:0000837!1.32e-14!165;CL:0000037!7.50e-14!172;CL:0000566!7.50e-14!172;CL:0002087!1.34e-13!119;CL:0000988!7.16e-13!182;CL:0000738!1.14e-12!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.38e-18;33!CL:0002057;4.38e-18;33!CL:0000473;1.85e-13;39!CL:0000234;1.85e-13;39!CL:0000766;1.85e-12;69!CL:0000097;2.53e-09;5!CL:0000576;1.12e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.01e-15,42;CL:0002057,1.01e-15,42;CL:0000839,2.11e-15,66;CL:0000557,3.48e-15,67;CL:0000766,3.42e-14,72;CL:0000473,7.54e-14,48;CL:0000234,7.54e-14,48;CL:0002194,3.21e-11,59;CL:0000576,3.21e-11,59;CL:0000040,3.21e-11,59;CL:0000559,3.21e-11,59;CL:0002009,7.02e-11,61;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0000097,2.53e-09,5;CL:0002028,2.53e-09,5;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;4.33e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.66e-17!80;UBERON:0001474!2.20e-15!86;UBERON:0004765!1.09e-12!101;UBERON:0001434!1.09e-12!101;UBERON:0002390!1.55e-12!102;UBERON:0003061!1.55e-12!102;UBERON:0002193!3.62e-11!112;UBERON:0002405!8.38e-11!115;UBERON:0002204!1.26e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-13,76;UBERON:0001474,1.45e-12,82;UBERON:0004765,1.62e-11,90;UBERON:0002405,3.61e-11,93;UBERON:0002390,1.23e-10,98;UBERON:0003061,1.23e-10,98;UBERON:0001434,1.95e-10,100;UBERON:0002193,1.03e-09,108 | |||
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|short_description=p@chr10:22540834..22540841,- | |||
}} | }} |
Latest revision as of 12:34, 23 July 2015
Short description: | p@chr10:22540834..22540841, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:22540834..22540841, - |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.01e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-15 | 42 |
myeloid lineage restricted progenitor cell | 2.11e-15 | 66 |
granulocyte monocyte progenitor cell | 3.48e-15 | 67 |
myeloid leukocyte | 3.42e-14 | 72 |
defensive cell | 7.54e-14 | 48 |
phagocyte | 7.54e-14 | 48 |
monopoietic cell | 3.21e-11 | 59 |
monocyte | 3.21e-11 | 59 |
monoblast | 3.21e-11 | 59 |
promonocyte | 3.21e-11 | 59 |
macrophage dendritic cell progenitor | 7.02e-11 | 61 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
mast cell | 2.53e-09 | 5 |
basophil mast progenitor cell | 2.53e-09 | 5 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.72e-13 | 76 |
bone element | 1.45e-12 | 82 |
skeletal element | 1.62e-11 | 90 |
immune system | 3.61e-11 | 93 |
hematopoietic system | 1.23e-10 | 98 |
blood island | 1.23e-10 | 98 |
skeletal system | 1.95e-10 | 100 |
hemolymphoid system | 1.03e-09 | 108 |