FFCP PHASE1:Hg19::chr10:27792917..27792923,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:27792917..27792923,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_at_chr10:27792917..27792923,- | |description=CAGE_peak_at_chr10:27792917..27792923,- | ||
|id=chr10:27792917..27792923,- | |id=chr10:27792917..27792923,- | ||
|ontology_enrichment_celltype=CL:0000084!2.25e-15!25;CL:0000827!2.25e-15!25;CL:0000838!2.34e-15!52;CL:0000542!5.30e-15!53;CL:0000051!5.30e-15!53;CL:0000623!1.70e-14!3;CL:0000825!1.70e-14!3;CL:0002087!4.72e-12!119;CL:0000738!7.09e-12!140;CL:0002031!1.80e-11!124;CL:0000791!5.05e-11!18;CL:0000789!5.05e-11!18;CL:0002420!5.05e-11!18;CL:0002419!5.05e-11!18;CL:0000790!5.05e-11!18;CL:0000037!1.15e-08!172;CL:0000566!1.15e-08!172;CL:0002032!2.46e-08!165;CL:0000837!2.46e-08!165;CL:0000988!6.72e-08!182;CL:0000624!5.04e-07!6 | |ontology_enrichment_celltype=CL:0000084!2.25e-15!25;CL:0000827!2.25e-15!25;CL:0000838!2.34e-15!52;CL:0000542!5.30e-15!53;CL:0000051!5.30e-15!53;CL:0000623!1.70e-14!3;CL:0000825!1.70e-14!3;CL:0002087!4.72e-12!119;CL:0000738!7.09e-12!140;CL:0002031!1.80e-11!124;CL:0000791!5.05e-11!18;CL:0000789!5.05e-11!18;CL:0002420!5.05e-11!18;CL:0002419!5.05e-11!18;CL:0000790!5.05e-11!18;CL:0000037!1.15e-08!172;CL:0000566!1.15e-08!172;CL:0002032!2.46e-08!165;CL:0000837!2.46e-08!165;CL:0000988!6.72e-08!182;CL:0000624!5.04e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000623;3.27e-23;3!CL:0000625;2.63e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.27e-23,3;CL:0000825,3.27e-23,3;CL:0000625,2.63e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.43e-10!4;UBERON:0005058!1.43e-10!4;UBERON:0009113!1.43e-10!4;UBERON:0003295!1.43e-10!4;UBERON:0005562!1.43e-10!4;UBERON:0003351!3.54e-07!6 | |ontology_enrichment_uberon=UBERON:0002370!1.43e-10!4;UBERON:0005058!1.43e-10!4;UBERON:0009113!1.43e-10!4;UBERON:0003295!1.43e-10!4;UBERON:0005562!1.43e-10!4;UBERON:0003351!3.54e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.61e-34;2!UBERON:0005058;3.61e-34;2!UBERON:0009113;3.61e-34;2!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.35e-18,4;UBERON:0005058,7.35e-18,4;UBERON:0009113,7.35e-18,4;UBERON:0003295,7.35e-18,4;UBERON:0005562,7.35e-18,4;UBERON:0003351,2.19e-12,6;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000974,5.73e-08,10;UBERON:0003408,5.73e-08,10;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0006562,2.32e-07,11;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11 | |||
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| ||
|short_description=p@chr10:27792917..27792923,- | |short_description=p@chr10:27792917..27792923,- | ||
}} | }} |
Latest revision as of 12:54, 23 July 2015
Short description: | p@chr10:27792917..27792923, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:27792917..27792923, - |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.27e-23 | 3 |
pro-NK cell | 3.27e-23 | 3 |
CD8-positive, alpha-beta T cell | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.35e-18 | 4 |
hemolymphoid system gland | 7.35e-18 | 4 |
thymic region | 7.35e-18 | 4 |
pharyngeal gland | 7.35e-18 | 4 |
thymus primordium | 7.35e-18 | 4 |
pharyngeal epithelium | 2.19e-12 | 6 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
neck | 5.73e-08 | 10 |
gland of gut | 5.73e-08 | 10 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
pharynx | 2.32e-07 | 11 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |