FFCP PHASE1:Hg19::chr10:28414812..28414824,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:28414812..28414824,- | |||
|coexpression_cluster_id=C199 | |coexpression_cluster_id=C199 | ||
|description=CAGE_peak_at_chr10:28414812..28414824,- | |description=CAGE_peak_at_chr10:28414812..28414824,- | ||
|id=chr10:28414812..28414824,- | |id=chr10:28414812..28414824,- | ||
|ontology_enrichment_celltype=CL:0002620!5.89e-18!23;CL:0000057!3.98e-07!75 | |ontology_enrichment_celltype=CL:0002620!5.89e-18!23;CL:0000057!3.98e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.38e-11;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.04e-11,23 | |||
|ontology_enrichment_development_v019=UBERON:0005795;5.76e-07;10 | |||
|ontology_enrichment_disease=DOID:0060084!4.30e-11!3;DOID:127!4.30e-11!3;DOID:0060072!2.09e-08!4 | |ontology_enrichment_disease=DOID:0060084!4.30e-11!3;DOID:127!4.30e-11!3;DOID:0060072!2.09e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:0060084;4.93e-21;3!DOID:127;4.93e-21;3!DOID:0060072;4.87e-16;4!DOID:154;7.21e-09;2!DOID:4236;7.21e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.46e-21,3;DOID:127,4.46e-21,3;DOID:0060072,4.51e-16,4;DOID:154,6.94e-09,2;DOID:4236,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.72e-09!40;UBERON:0003102!2.43e-08!95;UBERON:0002199!7.54e-08!45;UBERON:0002416!7.54e-08!45;UBERON:0000162!2.68e-07!14;UBERON:0001353!2.68e-07!14;UBERON:0000163!2.68e-07!14;UBERON:0006866!2.68e-07!14;UBERON:0000164!2.68e-07!14;UBERON:0000931!2.68e-07!14;UBERON:0004122!9.09e-07!15 | |ontology_enrichment_uberon=UBERON:0002097!3.72e-09!40;UBERON:0003102!2.43e-08!95;UBERON:0002199!7.54e-08!45;UBERON:0002416!7.54e-08!45;UBERON:0000162!2.68e-07!14;UBERON:0001353!2.68e-07!14;UBERON:0000163!2.68e-07!14;UBERON:0006866!2.68e-07!14;UBERON:0000164!2.68e-07!14;UBERON:0000931!2.68e-07!14;UBERON:0004122!9.09e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;9.57e-17;1!UBERON:0009842;9.57e-17;1!UBERON:0003704;9.57e-17;1!UBERON:0001171;9.57e-17;1!UBERON:0001172;9.57e-17;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.21e-16,1;UBERON:0009842,1.21e-16,1;UBERON:0003704,1.21e-16,1;UBERON:0001171,1.21e-16,1;UBERON:0001172,1.21e-16,1 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0.211931901159562,0,0.618315175430633,1.54584324027377,3.35010341396862,0.168776332241266,0.194874010322397,0.252433774244115,0.276149695926898,0,2.84007674013291,2.11579406278045,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803701137152247,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22439575525196,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05095700524602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0,0.219267951258557,0.164230914106418,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0.248505071130865,0,4.89255141865011,7.63600778080032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,1.08599920350743,0.864221491201268,1.63293680054705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0.438568099157414,0,0,0,0,0.345430341731199,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0.171488009437418,0,0,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784923038064294,0,0,0,0,0,0,0,0,2.24127426343202,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0.211931901159562,0,0.618315175430633,1.54584324027377,3.35010341396862,0.168776332241266,0.194874010322397,0.252433774244115,0.276149695926898,0,2.84007674013291,2.11579406278045,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803701137152247,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22439575525196,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05095700524602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0,0.219267951258557,0.164230914106418,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0.248505071130865,0,4.89255141865011,7.63600778080032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,1.08599920350743,0.864221491201268,1.63293680054705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0.438568099157414,0,0,0,0,0.345430341731199,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0.171488009437418,0,0,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784923038064294,0,0,0,0,0,0,0,0,2.24127426343202,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:28414812..28414824,- | |short_description=p@chr10:28414812..28414824,- | ||
}} | }} |
Latest revision as of 12:57, 23 July 2015
Short description: | p@chr10:28414812..28414824, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:28414812..28414824, - |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.04e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.21e-16 | 1 |
acinus | 1.21e-16 | 1 |
intrahepatic bile duct | 1.21e-16 | 1 |
portal lobule | 1.21e-16 | 1 |
hepatic acinus | 1.21e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.46e-21 | 3 |
leiomyoma | 4.46e-21 | 3 |
benign neoplasm | 4.51e-16 | 4 |
mixed cell type cancer | 6.94e-09 | 2 |
carcinosarcoma | 6.94e-09 | 2 |