FFCP PHASE1:Hg19::chr10:45472893..45472939,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:45472893..45472939,- to FFCP PHASE1:Hg19::chr10:45472893..45472939,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:45472893..45472939,- | |||
|coexpression_cluster_id=C409 | |||
|description=CAGE_peak_at_chr10:45472893..45472939,- | |||
|id=chr10:45472893..45472939,- | |||
|ontology_enrichment_celltype=CL:0002139!3.26e-12!24;CL:0000071!7.25e-12!18;CL:0002546!7.25e-12!18;CL:0000136!7.32e-11!15;CL:0000115!2.05e-09!35;CL:0002078!1.09e-08!44;CL:1000413!9.65e-08!9;CL:0000213!2.70e-07!57;CL:0000215!2.70e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.37e-20;13!CL:0000071;2.85e-17;18!CL:0002139;5.46e-16;24!CL:1000413;3.14e-12;9!CL:0000115;2.05e-10;36!CL:0002078;3.17e-08;45!CL:0002544;1.03e-07;6!CL:0002615;6.45e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.64e-17,15;CL:0000071,2.78e-17,18;CL:0002546,2.78e-17,18;CL:0002139,4.75e-16,24;CL:1000413,3.03e-12,9;CL:0000115,5.86e-12,36;CL:0002078,5.29e-11,45;CL:0000213,3.10e-08,58;CL:0000215,3.10e-08,58;CL:0002544,9.07e-08,6;CL:0002615,7.09e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;2.85e-17;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-18!115;UBERON:0004111!9.60e-13!241;UBERON:0000477!7.13e-12!286;UBERON:0001986!7.25e-12!18;UBERON:0004638!7.25e-12!18;UBERON:0004852!7.25e-12!18;UBERON:0000483!4.23e-11!309;UBERON:0000119!1.26e-10!312;UBERON:0006914!3.99e-10!25;UBERON:0000025!4.59e-10!194;UBERON:0000487!9.23e-10!22;UBERON:0003915!9.65e-08!9;UBERON:0004700!9.65e-08!9;UBERON:0001917!9.65e-08!9;UBERON:0004872!1.20e-07!84;UBERON:0000475!1.22e-07!365;UBERON:0009569!1.76e-07!113;UBERON:0003914!3.46e-07!118;UBERON:0000468!3.97e-07!659;UBERON:0004457!5.97e-07!12;UBERON:0000042!5.97e-07!12;UBERON:0002100!5.99e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.85e-17;18!UBERON:0001986;2.85e-17;18!UBERON:0004852;2.85e-17;18!UBERON:0000487;2.23e-15;22!UBERON:0006914;4.55e-15;25!UBERON:0003915;3.14e-12;9!UBERON:0004700;3.14e-12;9!UBERON:0001917;3.14e-12;9!UBERON:0003688;3.92e-11;6!UBERON:0002358;3.92e-11;6!UBERON:0003684;3.92e-11;6!UBERON:0001178;3.92e-11;6!UBERON:0004457;1.33e-09;9!UBERON:0000042;1.33e-09;9!UBERON:0000490;1.52e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.78e-17,18;UBERON:0001986,2.78e-17,18;UBERON:0004852,2.78e-17,18;UBERON:0000487,1.99e-15,22;UBERON:0006914,4.07e-15,25;UBERON:0007023,2.97e-12,114;UBERON:0003915,3.03e-12,9;UBERON:0004700,3.03e-12,9;UBERON:0001917,3.03e-12,9;UBERON:0003688,5.96e-11,6;UBERON:0002358,5.96e-11,6;UBERON:0003684,5.96e-11,6;UBERON:0001178,5.96e-11,6;UBERON:0004457,1.18e-08,12;UBERON:0000042,1.18e-08,12;UBERON:0004872,2.95e-08,83;UBERON:0009569,7.31e-08,112;UBERON:0003914,1.30e-07,117;UBERON:0007500,3.16e-07,59;UBERON:0001981,3.16e-07,59;UBERON:0004537,3.16e-07,59;UBERON:0006965,3.16e-07,59;UBERON:0000055,3.20e-07,68 | |||
|phase1_expression=5.81370813665781,4.71021152560163,5.49722175974288,4.00293193412522,7.59833860526389,1.74467704820074,2.53299878168311,8.84407822797563,0.522371256399677,0,0.697801167972428,0,0,0.866364470720326,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,1.50401373190767,1.73815822752988,0,0.973269740605272,0,0,0,2.03017567021455,0,0,0.324547393654683,0.348259474598534,0,0,0,0,3.18019851786728,1.72046919021225,3.81854551768354,2.26123176769604,6.29249154314859,3.57653454522088,1.46296476575767,0.516833518338658,0,2.67776490211736,6.44526907374635,0,10.4946684745713,0.367663080345869,6.48113558305408,1.87529429396568,0.44905874525234,1.12611480483322,6.13266549863533,0.949265659568129,2.38162267109529,0,0,0,0,0.886413581652058,0,0.860509862246441,0,0.560677600142307,1.06748995729705,0.98667019366864,0,1.0776853765575,0,0,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0.515281080091258,0.37223371266318,0,0.0974370051611986,0,0.184099797284599,0.484938170456436,0,0.10075209822764,0.169560592310488,0.386521706326594,0,0,0,0,0,0.10366105501537,0.504641701751257,0,0,0,0,2.3218396401599,1.44375896333917,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,5.31710916013264,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0.866198686566443,0,2.66355813128438,0,0,0,0,0,0,0,0.425325291727159,0,0,0.766765358330422,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,1.50719688529793,0,0.199945982364114,0,0,0,0,0,0,0,0.821905290201534,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,2.00068208423871,0,1.45579603071565,1.96271887676878,0.157702415033935,0.117141414992713,1.80567659836631,4.5481500811197,0,0,0,0,0,0,0,0,0,0,0,0,1.98486246255021,0.153461973288062,1.68396056659844,6.66323576129645,1.53512174720011,1.12597744800525,0,0,0,0.0821271560138091,0,0,0.241718899183244,1.00253235151642,0,0.114814448164607,0,1.83574180943194,0.451199612907412,0,0,0,0,1.13733384070897,0.170093705276516,0.431831832204279,4.62681758070868,0,0.501689773854853,0,1.66215201785745,0,0,0,0,0,0.325378394664303,5.564214628977,0,0,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0,0.0890320356467374,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.953150969619124,0.767693373934002,0,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0,1.58510321173008,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0.66343897524122,1.75380354101505,0.578775534266688,0,0.202910376962704,0,0,0,0,0,0,3.79993743535795,0.658589785919804,0,0,0,0,0,6.87249745670488,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.8433894118075,0,0.111443384277478,0,0,0,0,0,0.281338832821026,0,0,0,3.38721580026819,1.65770349318689,0.503865495708552,0.20453736500431,0,0.311039587661807,0,0,0,4.53759665929895,0,0,0,1.39152147242777,0,0,0,16.6749902350003,0.1137934482855,0,0,0,0,0,0,0.482385754501632,0,0.331737779793674,0.591095237907095,0.658156191461918,0,0,1.69290568708354,0,0.23056390438806,1.79515288819544,0.108647371922008,0,1.55715908783166,4.79731298416771,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,5.57282656371037,1.22206028986725,0,0.247127877893006,0.208843899010911,0.269604531922708,1.60515529459758,0.234264445725339,0,0,0.728341138602278,0.789168805698781,2.41981432097328,0.30607276163049,1.83241080922615,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,2.62090002363045,0.51595809741485,0,0,0,2.81268147816416,0,1.12990370390266,0,0,0,0,0.0801588202515337,1.70762395791482,0,0,0,1.37275998289572,0,0.124252535565433,0,0,0,0,0,0,0.273810757783986,0,0,0,2.23425921017803,0,5.74298419661451,0,1.28767814440971,1.56220020209311,0.134366944973453,0,0,0,0,0.0674035438541849,0.492137407573744,0,0,0.544813624446302,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0.419636705079985,0,0,0.191915197319445,1.42939065274673,4.63464379255802,0,1.08599920350743,0,0.653174720218818,0,0,0,0,2.78449243988357,5.30027555648885,0.387848869084652,0.66116300871345,0,0,9.93122936879561,5.97376359378731,8.28478110694391,3.96932817449561,0.197611631897944,0,0,5.98419583706421,28.3279580245651,17.4616978755173,28.1970462410432,0,0,0.366078794705889,0.250381861413,0.573409195690071,0.665574309221114,0.18628920882415,0,0,0.909894705249887,0,0.235265819698172,0,0.144921028610825,0,0.233713309847224,0,0,0.251567901752575,1.77962244319307,0.915360273587694,0.6049236950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| ||
|short_description=p@chr10:45472893..45472939,- | |||
}} | }} |
Latest revision as of 13:48, 23 July 2015
Short description: | p@chr10:45472893..45472939, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:45472893..45472939, - |
Coexpression cluster: | C409_adipose_mature_breast_lung_skeletal_Melanocyte_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.64e-17 | 15 |
blood vessel endothelial cell | 2.78e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.78e-17 | 18 |
endothelial cell of vascular tree | 4.75e-16 | 24 |
endothelial cell of artery | 3.03e-12 | 9 |
endothelial cell | 5.86e-12 | 36 |
meso-epithelial cell | 5.29e-11 | 45 |
lining cell | 3.10e-08 | 58 |
barrier cell | 3.10e-08 | 58 |
aortic endothelial cell | 9.07e-08 | 6 |
adipocyte of omentum tissue | 7.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.78e-17 | 18 |
endothelium | 2.78e-17 | 18 |
cardiovascular system endothelium | 2.78e-17 | 18 |
simple squamous epithelium | 1.99e-15 | 22 |
squamous epithelium | 4.07e-15 | 25 |
adult organism | 2.97e-12 | 114 |
endothelial tube | 3.03e-12 | 9 |
arterial system endothelium | 3.03e-12 | 9 |
endothelium of artery | 3.03e-12 | 9 |
omentum | 5.96e-11 | 6 |
peritoneum | 5.96e-11 | 6 |
abdominal cavity | 5.96e-11 | 6 |
visceral peritoneum | 5.96e-11 | 6 |
cavity lining | 1.18e-08 | 12 |
serous membrane | 1.18e-08 | 12 |
splanchnic layer of lateral plate mesoderm | 2.95e-08 | 83 |
subdivision of trunk | 7.31e-08 | 112 |
epithelial tube | 1.30e-07 | 117 |
epithelial tube open at both ends | 3.16e-07 | 59 |
blood vessel | 3.16e-07 | 59 |
blood vasculature | 3.16e-07 | 59 |
vascular cord | 3.16e-07 | 59 |
vessel | 3.20e-07 | 68 |