FFCP PHASE1:Hg19::chr10:4713643..4713647,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:4713643..4713647,+ | |||
|description=CAGE_peak_at_chr10:4713643..4713647,+ | |||
|id=chr10:4713643..4713647,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.00e-11!254;CL:0000083!4.74e-09!4;CL:0000223!1.08e-07!59;CL:0002620!9.65e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000083;1.49e-07;4!CL:0000244;1.86e-07;4!CL:0000731;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.49e-07,4;CL:0000244,1.69e-07,4;CL:0000731,1.69e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.24e-13!106;DOID:170!4.56e-10!6;DOID:0050687!5.58e-10!143;DOID:1793!4.74e-09!4;DOID:4929!8.82e-09!2;DOID:4074!1.39e-08!2;DOID:4905!1.39e-08!2;DOID:3498!1.39e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:4074;8.28e-14;2!DOID:4905;8.28e-14;2!DOID:4929;8.28e-14;2!DOID:3498;8.28e-14;2!DOID:4468;1.29e-13;2!DOID:1749;4.74e-08;14!DOID:1793;1.49e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,7.30e-14,2;DOID:4074,8.28e-14,2;DOID:4905,8.28e-14,2;DOID:3498,8.28e-14,2;DOID:4468,1.55e-13,2;DOID:305,1.57e-08,106;DOID:1749,4.82e-08,14;DOID:1793,1.49e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.68e-07!169;UBERON:0000925!2.68e-07!169;UBERON:0006595!2.68e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;3.58e-26;1!UBERON:0003703;3.58e-26;1!UBERON:0001174;3.58e-26;1!UBERON:0004914;3.58e-26;1!UBERON:0002114;1.19e-09;2!UBERON:0002394;1.49e-07;4!UBERON:0003928;1.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.78e-26,1;UBERON:0003703,2.78e-26,1;UBERON:0001174,2.78e-26,1;UBERON:0004914,2.78e-26,1;UBERON:0002114,1.10e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,1.06502877754984,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.765676274967505,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,2.18502341580683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0.397429223405979,0,0,0.400794101257669,0,0,0.72045208577053,0,0,0.14405479798815,3.72757606696298,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80926563812386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0.431855182437243,0.9555033757741,0,0,0,0,0,0.414432328326074,0.51215543128185,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11736923029415,1.12337913364836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p@chr10:4713643..4713647,+ | |||
}} |
Latest revision as of 13:51, 23 July 2015
Short description: | p@chr10:4713643..4713647, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4713643..4713647, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.49e-07 | 4 |
transitional epithelial cell | 1.69e-07 | 4 |
urothelial cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.78e-26 | 1 |
extrahepatic bile duct | 2.78e-26 | 1 |
common bile duct | 2.78e-26 | 1 |
duodenal papilla | 2.78e-26 | 1 |
duodenum | 1.10e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 7.30e-14 | 2 |
pancreas adenocarcinoma | 8.28e-14 | 2 |
pancreatic carcinoma | 8.28e-14 | 2 |
pancreatic ductal adenocarcinoma | 8.28e-14 | 2 |
clear cell adenocarcinoma | 1.55e-13 | 2 |
carcinoma | 1.57e-08 | 106 |
squamous cell carcinoma | 4.82e-08 | 14 |
pancreatic cancer | 1.49e-07 | 4 |