FFCP PHASE1:Hg19::chr10:49491044..49491055,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:49491044..49491055,- | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_at_chr10:49491044..49491055,- | |description=CAGE_peak_at_chr10:49491044..49491055,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!9.23e-25!24;CL:0000826!9.23e-25!24;CL:0000946!1.22e-17!1;CL:0000786!1.22e-17!1;CL:0000980!1.22e-17!1;CL:0000838!2.93e-15!52;CL:0000542!5.78e-15!53;CL:0000051!5.78e-15!53;CL:0000453!3.15e-14!5;CL:0000080!7.48e-12!6;CL:0000988!4.59e-10!182;CL:0000785!1.71e-09!2;CL:0000955!1.71e-09!2;CL:0000818!1.71e-09!2;CL:0000954!1.71e-09!2;CL:0000816!1.71e-09!2;CL:0000738!8.02e-09!140;CL:0000990!2.55e-08!8;CL:0002032!2.27e-07!165;CL:0000837!2.27e-07!165;CL:0000037!4.87e-07!172;CL:0000566!4.87e-07!172;CL:0000451!5.81e-07!10;CL:0000817!9.64e-07!3 | |ontology_enrichment_celltype=CL:0000945!9.23e-25!24;CL:0000826!9.23e-25!24;CL:0000946!1.22e-17!1;CL:0000786!1.22e-17!1;CL:0000980!1.22e-17!1;CL:0000838!2.93e-15!52;CL:0000542!5.78e-15!53;CL:0000051!5.78e-15!53;CL:0000453!3.15e-14!5;CL:0000080!7.48e-12!6;CL:0000988!4.59e-10!182;CL:0000785!1.71e-09!2;CL:0000955!1.71e-09!2;CL:0000818!1.71e-09!2;CL:0000954!1.71e-09!2;CL:0000816!1.71e-09!2;CL:0000738!8.02e-09!140;CL:0000990!2.55e-08!8;CL:0002032!2.27e-07!165;CL:0000837!2.27e-07!165;CL:0000037!4.87e-07!172;CL:0000566!4.87e-07!172;CL:0000451!5.81e-07!10;CL:0000817!9.64e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.00e-19;24 | |ontology_enrichment_celltype_v019=CL:0000945;2.00e-19;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.88e-19,24;CL:0000826,1.88e-19,24;CL:0000838,1.73e-09,52;CL:0000542,2.52e-09,53;CL:0000051,2.52e-09,53 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.18e-08;7 | |ontology_enrichment_development_v019=UBERON:0004872;2.18e-08;7 | ||
|ontology_enrichment_disease=DOID:630!5.26e-18!1;DOID:0050177!5.26e-18!1;DOID:0050427!5.26e-18!1;DOID:0060058!1.52e-07!10 | |ontology_enrichment_disease=DOID:630!5.26e-18!1;DOID:0050177!5.26e-18!1;DOID:0050427!5.26e-18!1;DOID:0060058!1.52e-07!10 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002331!1.79e-07!10;UBERON:0000358!1.79e-07!10;UBERON:0000307!1.79e-07!10;UBERON:0000091!1.79e-07!10;UBERON:0000087!1.79e-07!10;UBERON:0007806!1.79e-07!10;UBERON:0008780!1.79e-07!10;UBERON:0005728!1.79e-07!10;UBERON:0002106!6.88e-07!3;UBERON:0004854!6.88e-07!3;UBERON:0009034!6.88e-07!3;UBERON:0002095!6.88e-07!3;UBERON:0004782!6.88e-07!3;UBERON:0003281!6.88e-07!3;UBERON:0009664!6.88e-07!3;UBERON:0002296!6.88e-07!3;UBERON:0005602!6.88e-07!3;UBERON:0001179!6.88e-07!3;UBERON:0006293!6.88e-07!3 | |ontology_enrichment_uberon=UBERON:0002331!1.79e-07!10;UBERON:0000358!1.79e-07!10;UBERON:0000307!1.79e-07!10;UBERON:0000091!1.79e-07!10;UBERON:0000087!1.79e-07!10;UBERON:0007806!1.79e-07!10;UBERON:0008780!1.79e-07!10;UBERON:0005728!1.79e-07!10;UBERON:0002106!6.88e-07!3;UBERON:0004854!6.88e-07!3;UBERON:0009034!6.88e-07!3;UBERON:0002095!6.88e-07!3;UBERON:0004782!6.88e-07!3;UBERON:0003281!6.88e-07!3;UBERON:0009664!6.88e-07!3;UBERON:0002296!6.88e-07!3;UBERON:0005602!6.88e-07!3;UBERON:0001179!6.88e-07!3;UBERON:0006293!6.88e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;9.45e-18;3!UBERON:0004177;3.26e-11;5!UBERON:0005057;3.26e-11;5 | |ontology_enrichment_uberon_v019=UBERON:0002106;9.45e-18;3!UBERON:0004177;3.26e-11;5!UBERON:0005057;3.26e-11;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.12e-17,3;UBERON:0004854,1.12e-17,3;UBERON:0009034,1.12e-17,3;UBERON:0002095,1.12e-17,3;UBERON:0004782,1.12e-17,3;UBERON:0003281,1.12e-17,3;UBERON:0009664,1.12e-17,3;UBERON:0002296,1.12e-17,3;UBERON:0005602,1.12e-17,3;UBERON:0001179,1.12e-17,3;UBERON:0006293,1.12e-17,3;UBERON:0004177,2.35e-08,7;UBERON:0005057,2.35e-08,7;UBERON:0000945,1.80e-07,8;UBERON:0010039,1.80e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74425688164961,2.21671591514854,2.59745578335141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398594520940089,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19870543034844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74425688164961,2.21671591514854,2.59745578335141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398594520940089,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19870543034844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | ||
|short_description=p@chr10:49491044..49491055,- | |short_description=p@chr10:49491044..49491055,- | ||
}} | }} |
Latest revision as of 13:55, 23 July 2015
Short description: | p@chr10:49491044..49491055, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:49491044..49491055, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.88e-19 | 24 |
pro-B cell | 1.88e-19 | 24 |
lymphoid lineage restricted progenitor cell | 1.73e-09 | 52 |
lymphocyte | 2.52e-09 | 53 |
common lymphoid progenitor | 2.52e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.12e-17 | 3 |
gastrointestinal system mesentery | 1.12e-17 | 3 |
stomach region | 1.12e-17 | 3 |
mesentery | 1.12e-17 | 3 |
gastrointestinal system serosa | 1.12e-17 | 3 |
mesentery of stomach | 1.12e-17 | 3 |
gut mesentery | 1.12e-17 | 3 |
dorsal mesentery | 1.12e-17 | 3 |
dorsal mesogastrium | 1.12e-17 | 3 |
peritoneal cavity | 1.12e-17 | 3 |
spleen primordium | 1.12e-17 | 3 |
hemopoietic organ | 2.35e-08 | 7 |
immune organ | 2.35e-08 | 7 |
stomach | 1.80e-07 | 8 |
food storage organ | 1.80e-07 | 8 |