FFCP PHASE1:Hg19::chr10:63999878..63999893,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:63999878..63999893,-
|short_description=p@chr10:63999878..63999893,-
|description=CAGE_peak_at_chr10:63999878..63999893,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:63999878..63999893,- | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_at_chr10:63999878..63999893,- | |||
|id=chr10:63999878..63999893,- | |||
|ontology_enrichment_celltype=CL:0000791!3.00e-29!18;CL:0000789!3.00e-29!18;CL:0002420!3.00e-29!18;CL:0002419!3.00e-29!18;CL:0000790!3.00e-29!18;CL:0000084!2.47e-24!25;CL:0000827!2.47e-24!25;CL:0000625!2.92e-20!11;CL:0000838!1.34e-16!52;CL:0000542!3.83e-16!53;CL:0000051!3.83e-16!53;CL:0000624!1.17e-12!6;CL:0000738!5.17e-10!140;CL:0002087!1.72e-09!119;CL:0000898!3.05e-07!3;CL:0000037!6.99e-07!172;CL:0000566!6.99e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.79e-52;18!CL:0000789;3.79e-52;18!CL:0002419;3.79e-52;18!CL:0000084;1.07e-36;25!CL:0000624;3.32e-30;6!CL:0000625;3.21e-28;11!CL:0000898;3.16e-16;3!CL:0000815;7.35e-12;2!CL:0000792;7.35e-12;2!CL:0002677;7.35e-12;2!CL:0000542;1.52e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.77e-52,18;CL:0000789,2.77e-52,18;CL:0002420,2.77e-52,18;CL:0002419,2.77e-52,18;CL:0000790,2.77e-52,18;CL:0000084,8.55e-37,25;CL:0000827,8.55e-37,25;CL:0000624,2.45e-30,6;CL:0000625,2.99e-28,11;CL:0000898,2.78e-16,3;CL:0000838,4.10e-16,52;CL:0000542,9.40e-16,53;CL:0000051,9.40e-16,53;CL:0000815,7.35e-12,2;CL:0000792,7.35e-12,2;CL:0002677,7.35e-12,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.79e-52;18!CL:0000051;1.52e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.23e-14!15;UBERON:0000179!3.23e-14!15;UBERON:0000463!3.23e-14!15;UBERON:0007023!4.75e-07!115;UBERON:0004177!5.52e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.85e-20;15!UBERON:0000179;2.85e-20;15!UBERON:0000463;2.85e-20;15!UBERON:0002390;9.30e-15;32!UBERON:0002370;1.66e-10;2!UBERON:0005058;1.66e-10;2!UBERON:0009113;1.66e-10;2!UBERON:0002193;3.64e-10;42!UBERON:0004177;3.80e-09;5!UBERON:0005057;3.80e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.25e-20,15;UBERON:0000179,3.25e-20,15;UBERON:0000463,3.25e-20,15;UBERON:0002370,2.39e-11,4;UBERON:0005058,2.39e-11,4;UBERON:0009113,2.39e-11,4;UBERON:0003295,2.39e-11,4;UBERON:0005562,2.39e-11,4;UBERON:0004177,4.16e-11,7;UBERON:0005057,4.16e-11,7;UBERON:0003351,1.00e-07,6 | |||
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| ||
|short_description=p@chr10:63999878..63999893,- | |||
}} | }} |
Latest revision as of 14:38, 23 July 2015
Short description: | p@chr10:63999878..63999893, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:63999878..63999893, - |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.77e-52 | 18 |
alpha-beta T cell | 2.77e-52 | 18 |
immature T cell | 2.77e-52 | 18 |
mature T cell | 2.77e-52 | 18 |
immature alpha-beta T cell | 2.77e-52 | 18 |
T cell | 8.55e-37 | 25 |
pro-T cell | 8.55e-37 | 25 |
CD4-positive, alpha-beta T cell | 2.45e-30 | 6 |
CD8-positive, alpha-beta T cell | 2.99e-28 | 11 |
naive T cell | 2.78e-16 | 3 |
lymphoid lineage restricted progenitor cell | 4.10e-16 | 52 |
lymphocyte | 9.40e-16 | 53 |
common lymphoid progenitor | 9.40e-16 | 53 |
regulatory T cell | 7.35e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.35e-12 | 2 |
naive regulatory T cell | 7.35e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.25e-20 | 15 |
haemolymphatic fluid | 3.25e-20 | 15 |
organism substance | 3.25e-20 | 15 |
thymus | 2.39e-11 | 4 |
hemolymphoid system gland | 2.39e-11 | 4 |
thymic region | 2.39e-11 | 4 |
pharyngeal gland | 2.39e-11 | 4 |
thymus primordium | 2.39e-11 | 4 |
hemopoietic organ | 4.16e-11 | 7 |
immune organ | 4.16e-11 | 7 |
pharyngeal epithelium | 1.00e-07 | 6 |