FFCP PHASE1:Hg19::chr10:8087114..8087132,+: Difference between revisions
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|id=chr10:8087114..8087132,+
|short_description=p@chr10:8087114..8087132,+
|description=CAGE_peak_at_chr10:8087114..8087132,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:8087114..8087132,+ | |||
|coexpression_cluster_id=C3050 | |||
|description=CAGE_peak_at_chr10:8087114..8087132,+ | |||
|id=chr10:8087114..8087132,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.48e-20;5!CL:0000214;1.67e-09;3!CL:0002327;1.40e-07;4!CL:0002321;1.65e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.67e-09,3;CL:0002327,1.40e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.78e-26;1!UBERON:0005754;4.61e-26;1!UBERON:0007297;9.40e-14;2!UBERON:0003918;6.28e-11;10!UBERON:0007687;6.28e-11;10 | |||
|ontology_enrichment_disease=DOID:5093!2.62e-18!4;DOID:1612!2.62e-18!4;DOID:4929!5.56e-09!2;DOID:169!4.30e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.64e-26;4!DOID:1612;7.64e-26;4!DOID:169;2.58e-17;6!DOID:3095;8.20e-11;22!DOID:2994;8.20e-11;22!DOID:171;8.47e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.73e-26,4;DOID:1612,6.73e-26,4;DOID:169,2.58e-17,6;DOID:3095,8.20e-11,22;DOID:2994,8.20e-11,22;DOID:171,8.47e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.94e-08!5;UBERON:0002410!1.94e-08!5;UBERON:0000310!2.48e-07!10;UBERON:0006947!7.68e-07!3;UBERON:0004054!7.68e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;4.61e-26;1!UBERON:0006868;4.61e-26;1!UBERON:0000013;1.48e-20;5!UBERON:0002410;1.48e-20;5!UBERON:0000010;6.88e-12;8!UBERON:0000310;5.69e-11;10!UBERON:0001443;4.62e-10;11!UBERON:0006947;1.30e-09;3!UBERON:0004054;1.30e-09;3!UBERON:0006915;1.67e-09;3!UBERON:0007616;1.67e-09;3!UBERON:0002217;1.67e-09;3!UBERON:0002018;1.67e-09;3!UBERON:0001911;1.40e-07;4!UBERON:0005904;1.59e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,5.93e-26,1;UBERON:0006868,5.93e-26,1;UBERON:0000013,1.48e-20,5;UBERON:0002410,1.48e-20,5;UBERON:0000010,6.88e-12,8;UBERON:0000310,5.41e-11,10;UBERON:0001443,4.42e-10,11;UBERON:0006947,1.41e-09,3;UBERON:0004054,1.41e-09,3;UBERON:0006915,1.67e-09,3;UBERON:0007616,1.67e-09,3;UBERON:0002217,1.67e-09,3;UBERON:0002018,1.67e-09,3;UBERON:0001911,1.40e-07,4;UBERON:0005333,1.40e-07,4;UBERON:0008425,1.40e-07,4;UBERON:0005311,1.40e-07,4;UBERON:0005904,1.69e-07,4 | |||
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| ||
|short_description=p@chr10:8087114..8087132,+ | |||
}} | }} |
Latest revision as of 15:52, 23 July 2015
Short description: | p@chr10:8087114..8087132, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8087114..8087132, + |
Coexpression cluster: | C3050_teratocarcinoma_breast_seminal_neuroblastoma_MCF7_kidney_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.67e-09 | 3 |
mammary gland epithelial cell | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 5.93e-26 | 1 |
seminal fluid secreting gland | 5.93e-26 | 1 |
sympathetic nervous system | 1.48e-20 | 5 |
autonomic nervous system | 1.48e-20 | 5 |
peripheral nervous system | 6.88e-12 | 8 |
breast | 5.41e-11 | 10 |
chest | 4.42e-10 | 11 |
male genital duct | 1.41e-09 | 3 |
internal male genitalia | 1.41e-09 | 3 |
stratified squamous epithelium | 1.67e-09 | 3 |
layer of synovial tissue | 1.67e-09 | 3 |
synovial joint | 1.67e-09 | 3 |
synovial membrane of synovial joint | 1.67e-09 | 3 |
mammary gland | 1.40e-07 | 4 |
mammary bud | 1.40e-07 | 4 |
mammary ridge | 1.40e-07 | 4 |
mammary placode | 1.40e-07 | 4 |
duct of male reproductive system | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.73e-26 | 4 |
breast cancer | 6.73e-26 | 4 |
neuroendocrine tumor | 2.58e-17 | 6 |
germ cell and embryonal cancer | 8.20e-11 | 22 |
germ cell cancer | 8.20e-11 | 22 |
neuroectodermal tumor | 8.47e-11 | 10 |