FFCP PHASE1:Hg19::chr10:88715938..88715944,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:88715938..88715944,+ | |||
|coexpression_cluster_id=C196 | |||
|description=CAGE_peak_at_chr10:88715938..88715944,+ | |description=CAGE_peak_at_chr10:88715938..88715944,+ | ||
|id=chr10:88715938..88715944,+ | |id=chr10:88715938..88715944,+ | ||
|ontology_enrichment_celltype=CL:0000039!3.63e-19!7;CL:0000586!3.63e-19!7;CL:0002322!2.67e-12!5;CL:0002543!2.52e-10!6;CL:0000071!1.16e-07!18;CL:0002546!1.16e-07!18 | |ontology_enrichment_celltype=CL:0000039!3.63e-19!7;CL:0000586!3.63e-19!7;CL:0002322!2.67e-12!5;CL:0002543!2.52e-10!6;CL:0000071!1.16e-07!18;CL:0002546!1.16e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.78e-29;7!CL:0000586;1.78e-29;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.78e-29,7;CL:0000586,1.78e-29,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.81e-21;10!UBERON:0005564;3.81e-21;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22!DOID:193;2.67e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22;DOID:193,2.67e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.42e-17!8;UBERON:0002079!7.46e-16!1;UBERON:0003135!1.97e-12!11;UBERON:0002081!1.39e-08!2;UBERON:0001986!1.16e-07!18;UBERON:0004638!1.16e-07!18;UBERON:0004852!1.16e-07!18;UBERON:0001638!3.55e-07!9;UBERON:0003920!3.55e-07!9;UBERON:0004582!3.55e-07!9;UBERON:0000991!9.12e-07!21;UBERON:0009196!9.12e-07!21;UBERON:0009117!9.12e-07!21;UBERON:0005564!9.12e-07!21 | |ontology_enrichment_uberon=UBERON:0000473!7.42e-17!8;UBERON:0002079!7.46e-16!1;UBERON:0003135!1.97e-12!11;UBERON:0002081!1.39e-08!2;UBERON:0001986!1.16e-07!18;UBERON:0004638!1.16e-07!18;UBERON:0004852!1.16e-07!18;UBERON:0001638!3.55e-07!9;UBERON:0003920!3.55e-07!9;UBERON:0004582!3.55e-07!9;UBERON:0000991!9.12e-07!21;UBERON:0009196!9.12e-07!21;UBERON:0009117!9.12e-07!21;UBERON:0005564!9.12e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.22e-26;8!UBERON:0003135;2.25e-19;11!UBERON:0000991;6.74e-11;21!UBERON:0003101;1.80e-10;22!UBERON:0000079;1.80e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.22e-26,8;UBERON:0003135,2.25e-19,11;UBERON:0000991,6.74e-11,21;UBERON:0009196,6.74e-11,21;UBERON:0009117,6.74e-11,21;UBERON:0005564,6.74e-11,21;UBERON:0004176,1.80e-10,22;UBERON:0003101,1.80e-10,22;UBERON:0000079,1.80e-10,22 | |||
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|short_description=p@chr10:88715938..88715944,+ | |short_description=p@chr10:88715938..88715944,+ | ||
}} | }} |
Latest revision as of 16:22, 23 July 2015
Short description: | p@chr10:88715938..88715944, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:88715938..88715944, + |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.78e-29 | 7 |
germ cell | 1.78e-29 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.22e-26 | 8 |
male reproductive organ | 2.25e-19 | 11 |
gonad | 6.74e-11 | 21 |
indifferent external genitalia | 6.74e-11 | 21 |
indifferent gonad | 6.74e-11 | 21 |
gonad primordium | 6.74e-11 | 21 |
external genitalia | 1.80e-10 | 22 |
male organism | 1.80e-10 | 22 |
male reproductive system | 1.80e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |
reproductive organ cancer | 2.67e-08 | 29 |