FFCP PHASE1:Hg19::chr10:9060848..9060862,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:9060848..9060862,- | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr10:9060848..9060862,- | |description=CAGE_peak_at_chr10:9060848..9060862,- | ||
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|ontology_enrichment_celltype=CL:0000791!2.43e-35!18;CL:0000789!2.43e-35!18;CL:0002420!2.43e-35!18;CL:0002419!2.43e-35!18;CL:0000790!2.43e-35!18;CL:0000084!1.83e-24!25;CL:0000827!1.83e-24!25;CL:0000625!4.78e-24!11;CL:0000838!5.24e-17!52;CL:0000542!1.33e-16!53;CL:0000051!1.33e-16!53;CL:0000624!3.36e-15!6;CL:0000842!6.61e-11!3;CL:0000623!2.21e-10!3;CL:0000825!2.21e-10!3;CL:0002087!2.53e-10!119;CL:0000224!2.78e-08!4;CL:0000738!5.86e-08!140;CL:0002537!4.20e-07!5;CL:0002031!6.76e-07!124 | |ontology_enrichment_celltype=CL:0000791!2.43e-35!18;CL:0000789!2.43e-35!18;CL:0002420!2.43e-35!18;CL:0002419!2.43e-35!18;CL:0000790!2.43e-35!18;CL:0000084!1.83e-24!25;CL:0000827!1.83e-24!25;CL:0000625!4.78e-24!11;CL:0000838!5.24e-17!52;CL:0000542!1.33e-16!53;CL:0000051!1.33e-16!53;CL:0000624!3.36e-15!6;CL:0000842!6.61e-11!3;CL:0000623!2.21e-10!3;CL:0000825!2.21e-10!3;CL:0002087!2.53e-10!119;CL:0000224!2.78e-08!4;CL:0000738!5.86e-08!140;CL:0002537!4.20e-07!5;CL:0002031!6.76e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.29e-35;18!CL:0000789;1.29e-35;18!CL:0002419;1.29e-35;18!CL:0000624;4.89e-28;6!CL:0000084;1.97e-25;25!CL:0000898;4.13e-15;3!CL:0000625;4.29e-15;11!CL:0002541;5.11e-15;3!CL:0000895;6.97e-12;1!CL:0002537;1.10e-09;5!CL:0000349;2.93e-09;19 | |ontology_enrichment_celltype_v019=CL:0000791;1.29e-35;18!CL:0000789;1.29e-35;18!CL:0002419;1.29e-35;18!CL:0000624;4.89e-28;6!CL:0000084;1.97e-25;25!CL:0000898;4.13e-15;3!CL:0000625;4.29e-15;11!CL:0002541;5.11e-15;3!CL:0000895;6.97e-12;1!CL:0002537;1.10e-09;5!CL:0000349;2.93e-09;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.32e-35,18;CL:0000789,1.32e-35,18;CL:0002420,1.32e-35,18;CL:0002419,1.32e-35,18;CL:0000790,1.32e-35,18;CL:0000624,4.72e-28,6;CL:0000084,2.01e-25,25;CL:0000827,2.01e-25,25;CL:0000898,4.28e-15,3;CL:0000625,4.45e-15,11;CL:0002541,4.94e-15,3;CL:0000810,7.76e-12,1;CL:0000895,7.76e-12,1;CL:0002436,7.76e-12,1;CL:0002427,7.76e-12,1;CL:0002428,7.76e-12,1;CL:0002429,7.76e-12,1;CL:0002433,7.76e-12,1;CL:0002431,7.76e-12,1;CL:0002432,7.76e-12,1;CL:0000838,8.83e-12,52;CL:0000542,1.53e-11,53;CL:0000051,1.53e-11,53;CL:0002537,1.10e-09,5;CL:0000349,2.90e-09,19 | |||
|ontology_enrichment_development_v019=CL:0000790;1.29e-35;18!CL:0002427;6.97e-12;1 | |ontology_enrichment_development_v019=CL:0000790;1.29e-35;18!CL:0002427;6.97e-12;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.26e-15!14;UBERON:0000158!4.26e-15!14;UBERON:0000178!2.37e-13!15;UBERON:0000179!2.37e-13!15;UBERON:0000463!2.37e-13!15;UBERON:0000305!2.09e-08!7;UBERON:0003124!2.58e-08!7;UBERON:0000478!3.24e-08!24;UBERON:0004871!2.37e-07!8 | |ontology_enrichment_uberon=UBERON:0005631!4.26e-15!14;UBERON:0000158!4.26e-15!14;UBERON:0000178!2.37e-13!15;UBERON:0000179!2.37e-13!15;UBERON:0000463!2.37e-13!15;UBERON:0000305!2.09e-08!7;UBERON:0003124!2.58e-08!7;UBERON:0000478!3.24e-08!24;UBERON:0004871!2.37e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.14e-17;10!UBERON:0000158;2.14e-17;10!UBERON:0003124;5.11e-15;3!UBERON:0000920;5.11e-15;3!UBERON:0000478;2.31e-07;24!UBERON:0000305;3.72e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0005631;2.14e-17;10!UBERON:0000158;2.14e-17;10!UBERON:0003124;5.11e-15;3!UBERON:0000920;5.11e-15;3!UBERON:0000478;2.31e-07;24!UBERON:0000305;3.72e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.94e-15,3;UBERON:0005631,1.67e-12,14;UBERON:0000158,1.67e-12,14;UBERON:0000478,2.30e-07,24;UBERON:0000305,3.72e-07,7;UBERON:0003124,6.02e-07,7 | |||
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| ||
|short_description=p@chr10:9060848..9060862,- | |short_description=p@chr10:9060848..9060862,- | ||
}} | }} |
Latest revision as of 16:28, 23 July 2015
Short description: | p@chr10:9060848..9060862, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:9060848..9060862, - |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.32e-35 | 18 |
alpha-beta T cell | 1.32e-35 | 18 |
immature T cell | 1.32e-35 | 18 |
mature T cell | 1.32e-35 | 18 |
immature alpha-beta T cell | 1.32e-35 | 18 |
CD4-positive, alpha-beta T cell | 4.72e-28 | 6 |
T cell | 2.01e-25 | 25 |
pro-T cell | 2.01e-25 | 25 |
naive T cell | 4.28e-15 | 3 |
CD8-positive, alpha-beta T cell | 4.45e-15 | 11 |
chorionic membrane mesenchymal stem cell | 4.94e-15 | 3 |
CD4-positive, alpha-beta thymocyte | 7.76e-12 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 7.76e-12 | 1 |
mature CD4 single-positive thymocyte | 7.76e-12 | 1 |
resting double-positive thymocyte | 7.76e-12 | 1 |
double-positive blast | 7.76e-12 | 1 |
CD69-positive double-positive thymocyte | 7.76e-12 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 7.76e-12 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 7.76e-12 | 1 |
CD24-positive, CD4 single-positive thymocyte | 7.76e-12 | 1 |
lymphoid lineage restricted progenitor cell | 8.83e-12 | 52 |
lymphocyte | 1.53e-11 | 53 |
common lymphoid progenitor | 1.53e-11 | 53 |
amnion mesenchymal stem cell | 1.10e-09 | 5 |
extraembryonic cell | 2.90e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.94e-15 | 3 |
extraembryonic membrane | 1.67e-12 | 14 |
membranous layer | 1.67e-12 | 14 |
extraembryonic structure | 2.30e-07 | 24 |
amnion | 3.72e-07 | 7 |
chorion | 6.02e-07 | 7 |