FFCP PHASE1:Hg19::chr11:117997240..117997243,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:117997240..117997243,+
|short_description=p@chr11:117997240..117997243,+
|description=CAGE_peak_at_chr11:117997240..117997243,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:117997240..117997243,+ | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_at_chr11:117997240..117997243,+ | |||
|id=chr11:117997240..117997243,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.14e-20!254;CL:0002076!5.02e-12!43;CL:0000223!4.81e-11!59 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.51e-10;13!CL:0000307;1.02e-09;3!CL:0001014;1.67e-07;2!CL:0001016;1.67e-07;2!CL:0002076;1.85e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.04e-10,13;CL:0000068,1.38e-09,3;CL:0000069,1.38e-09,3;CL:0000307,1.38e-09,3;CL:0000377,1.38e-09,3;CL:0002076,2.65e-09,42;CL:0000066,1.58e-08,253;CL:0001014,2.05e-07,2;CL:0001016,2.05e-07,2;CL:0000223,4.46e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000377;1.02e-09;3 | |||
|ontology_enrichment_disease=DOID:162!1.37e-37!235;DOID:14566!8.36e-36!239;DOID:0050687!3.33e-31!143;DOID:305!1.16e-21!106;DOID:0050686!6.06e-15!137;DOID:1749!6.03e-11!14;DOID:299!1.68e-07!25;DOID:7!5.67e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.40e-13;14!DOID:0060058;1.52e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.57e-13,14;DOID:162,4.14e-12,235;DOID:14566,1.20e-11,239;DOID:0050687,2.97e-10,143;DOID:7,2.05e-08,39;DOID:0060058,1.68e-07,10;DOID:305,2.60e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000344!9.34e-09!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000344;2.78e-08;20!UBERON:0003343;1.66e-07;4!UBERON:0004785;1.66e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.17e-08,20;UBERON:0003343,1.21e-07,4;UBERON:0004785,1.21e-07,4 | |||
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| ||
|short_description=p@chr11:117997240..117997243,+ | |||
}} | }} |
Latest revision as of 18:42, 23 July 2015
Short description: | p@chr11:117997240..117997243, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:117997240..117997243, + |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.04e-10 | 13 |
duct epithelial cell | 1.38e-09 | 3 |
branched duct epithelial cell | 1.38e-09 | 3 |
tracheal epithelial cell | 1.38e-09 | 3 |
tracheoblast | 1.38e-09 | 3 |
endo-epithelial cell | 2.65e-09 | 42 |
epithelial cell | 1.58e-08 | 253 |
CD1a-positive Langerhans cell | 2.05e-07 | 2 |
immature CD1a-positive Langerhans cell | 2.05e-07 | 2 |
endodermal cell | 4.46e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.17e-08 | 20 |
mucosa of oral region | 1.21e-07 | 4 |
respiratory system mucosa | 1.21e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.57e-13 | 14 |
cancer | 4.14e-12 | 235 |
disease of cellular proliferation | 1.20e-11 | 239 |
cell type cancer | 2.97e-10 | 143 |
disease of anatomical entity | 2.05e-08 | 39 |
lymphoma | 1.68e-07 | 10 |
carcinoma | 2.60e-07 | 106 |