FFCP PHASE1:Hg19::chr11:118209551..118209563,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:118209551..118209563,+ | |||
|coexpression_cluster_id=C476 | |||
|description=CAGE_peak_at_chr11:118209551..118209563,+ | |||
|id=chr11:118209551..118209563,+ | |||
|ontology_enrichment_celltype=CL:0000791!6.85e-36!18;CL:0000789!6.85e-36!18;CL:0002420!6.85e-36!18;CL:0002419!6.85e-36!18;CL:0000790!6.85e-36!18;CL:0000084!9.95e-29!25;CL:0000827!9.95e-29!25;CL:0000542!6.40e-22!53;CL:0000051!6.40e-22!53;CL:0000624!1.39e-21!6;CL:0000838!3.59e-20!52;CL:0000625!2.14e-19!11;CL:0000738!4.12e-16!140;CL:0000037!8.71e-13!172;CL:0000566!8.71e-13!172;CL:0002087!5.63e-12!119;CL:0000623!6.10e-12!3;CL:0000825!6.10e-12!3;CL:0000988!1.15e-11!182;CL:0000898!1.25e-11!3;CL:0002032!1.64e-10!165;CL:0000837!1.64e-10!165;CL:0000815!2.96e-08!2;CL:0000792!2.96e-08!2;CL:0002677!2.96e-08!2;CL:0002031!3.17e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.45e-34;6!CL:0000791;1.69e-28;18!CL:0000789;1.69e-28;18!CL:0002419;1.69e-28;18!CL:0000623;8.77e-26;3!CL:0000084;1.57e-25;25!CL:0000542;1.59e-12;53!CL:0000898;3.67e-12;3!CL:0000895;1.76e-09;1!CL:0000625;2.00e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.14e-34,6;CL:0000791,1.52e-28,18;CL:0000789,1.52e-28,18;CL:0002420,1.52e-28,18;CL:0002419,1.52e-28,18;CL:0000790,1.52e-28,18;CL:0000623,1.04e-25,3;CL:0000825,1.04e-25,3;CL:0000084,1.58e-25,25;CL:0000827,1.58e-25,25;CL:0000838,6.12e-21,52;CL:0000542,1.66e-20,53;CL:0000051,1.66e-20,53;CL:0000898,2.69e-12,3;CL:0000810,1.25e-09,1;CL:0000895,1.25e-09,1;CL:0002436,1.25e-09,1;CL:0002427,1.25e-09,1;CL:0002428,1.25e-09,1;CL:0002429,1.25e-09,1;CL:0002433,1.25e-09,1;CL:0002431,1.25e-09,1;CL:0002432,1.25e-09,1;CL:0000738,1.84e-09,136;CL:0000037,2.02e-08,168;CL:0002087,2.84e-08,115;CL:0000988,7.34e-08,177;CL:0002031,7.55e-08,120;CL:0002032,1.33e-07,161;CL:0000837,1.33e-07,161;CL:0000625,1.95e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.69e-28;18!CL:0000051;1.59e-12;53!CL:0002427;1.76e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.43e-12!7;UBERON:0002370!4.49e-09!4;UBERON:0005058!4.49e-09!4;UBERON:0009113!4.49e-09!4;UBERON:0003295!4.49e-09!4;UBERON:0005562!4.49e-09!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.81e-18;2!UBERON:0005058;6.81e-18;2!UBERON:0009113;6.81e-18;2!UBERON:0004177;1.08e-07;5!UBERON:0005057;1.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.67e-19,4;UBERON:0005058,1.67e-19,4;UBERON:0009113,1.67e-19,4;UBERON:0003295,1.67e-19,4;UBERON:0005562,1.67e-19,4;UBERON:0003351,3.36e-13,6;UBERON:0004177,2.16e-11,7;UBERON:0005057,2.16e-11,7;UBERON:0000974,4.02e-08,10;UBERON:0003408,4.02e-08,10;UBERON:0001042,4.02e-08,10;UBERON:0009145,4.02e-08,10;UBERON:0006562,2.00e-07,11;UBERON:0009722,2.00e-07,11;UBERON:0007690,2.00e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.57367816091066,1.17903228824749,2.87842098599313,0,3.58514493296949,1.4203434172042,1.94826728407911,0.334231370655521,0.294605907474837,0.664601683750863,0.270803863765016,0,0,0,0,0.579606171470105,2.37258501059297,3.47803076516627,3.1360657141493,0,1.91610246800961,2.40539211837841,1.77113784413652,0.637130828648193,0,0,0.150575119077773,0.511946444617674,0,0.236777252044017,0.821127996921047,3.02410114837099,1.87208137048455,2.46201486600758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95546140302891,3.23441362289276,1.28343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,1.35169502361987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,1.67931165573616,6.95236800113608,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr11:118209551..118209563,+ | |||
}} |
Latest revision as of 18:45, 23 July 2015
Short description: | p@chr11:118209551..118209563, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:118209551..118209563, + |
Coexpression cluster: | C476_thymus_acute_Hodgkin_CD4_CD8_chronic_vein |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.67e-19 | 4 |
hemolymphoid system gland | 1.67e-19 | 4 |
thymic region | 1.67e-19 | 4 |
pharyngeal gland | 1.67e-19 | 4 |
thymus primordium | 1.67e-19 | 4 |
pharyngeal epithelium | 3.36e-13 | 6 |
hemopoietic organ | 2.16e-11 | 7 |
immune organ | 2.16e-11 | 7 |
neck | 4.02e-08 | 10 |
gland of gut | 4.02e-08 | 10 |
chordate pharynx | 4.02e-08 | 10 |
pharyngeal region of foregut | 4.02e-08 | 10 |
pharynx | 2.00e-07 | 11 |
entire pharyngeal arch endoderm | 2.00e-07 | 11 |
early pharyngeal endoderm | 2.00e-07 | 11 |