FFCP PHASE1:Hg19::chr11:121971544..121971559,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=177bp_to_ENST00000528986_5end | |association_with_transcript=177bp_to_ENST00000528986_5end | ||
|cluster_id=chr11:121971544..121971559,- | |||
|coexpression_cluster_id=C3102 | |coexpression_cluster_id=C3102 | ||
|description=CAGE_peak_2_at_ENST00000528986_5end | |description=CAGE_peak_2_at_ENST00000528986_5end |
Latest revision as of 19:16, 23 July 2015
Short description: | p2@ENST00000528986 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000528986_5end |
Coexpression cluster: | C3102_parietal_small_Fibroblast_Preadipocyte_occipital_temporal_duodenum |
Association with transcript: | 177bp_to_ENST00000528986_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@ENST00000528986 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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skin fibroblast | 2.08e-11 | 23 |
fibroblast | 2.72e-10 | 76 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.66e-34 | 81 |
neural tube | 2.21e-33 | 56 |
neural rod | 2.21e-33 | 56 |
future spinal cord | 2.21e-33 | 56 |
neural keel | 2.21e-33 | 56 |
regional part of nervous system | 2.10e-32 | 53 |
regional part of brain | 2.10e-32 | 53 |
nervous system | 2.19e-31 | 89 |
brain | 2.95e-28 | 68 |
future brain | 2.95e-28 | 68 |
Showing 1 to 10 of 57 entries
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.02e-07 | 5 |
myotonic disease | 1.02e-07 | 5 |
muscle tissue disease | 1.02e-07 | 5 |
myopathy | 1.02e-07 | 5 |
muscular disease | 1.02e-07 | 5 |
myotonic dystrophy | 1.02e-07 | 5 |
Showing 1 to 6 of 6 entries