FFCP PHASE1:Hg19::chr11:122051194..122051210,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:122051194..122051210,- to FFCP PHASE1:Hg19::chr11:122051194..122051210,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-86bp_to_ENST00000533109_5end | |||
|cluster_id=chr11:122051194..122051210,- | |||
|coexpression_cluster_id=C1617 | |||
|description=CAGE_peak_5_at_ENST00000533109_5end | |||
|id=chr11:122051194..122051210,- | |||
|ontology_enrichment_celltype=CL:0000055!1.58e-39!180;CL:0000057!4.21e-21!75;CL:0000220!4.46e-17!246;CL:0002321!1.60e-16!248;CL:0000680!2.73e-16!57;CL:0000056!2.73e-16!57;CL:0000355!2.73e-16!57;CL:0000187!5.18e-15!54;CL:0000183!7.32e-14!59;CL:0000548!2.75e-13!679;CL:0000004!2.75e-13!679;CL:0000255!2.75e-13!679;CL:0000012!9.84e-13!682;CL:0000222!1.37e-12!119;CL:0000393!3.16e-12!60;CL:0000211!3.16e-12!60;CL:0002620!3.81e-12!23;CL:0000144!1.39e-11!625;CL:0000192!3.83e-11!42;CL:0000514!3.83e-11!42;CL:0002371!4.32e-11!591;CL:0000359!3.09e-09!32;CL:0000003!4.77e-08!722 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.76e-16;23!CL:0000057;1.20e-10;73!CL:0000187;1.14e-07;55!CL:0000359;1.26e-07;32!CL:0002556;2.38e-07;6!CL:0002320;2.70e-07;188!CL:0000192;3.85e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.26e-24,76;CL:0002620,1.90e-16,23;CL:0000680,8.05e-14,58;CL:0000056,8.05e-14,58;CL:0000355,8.05e-14,58;CL:0000187,2.70e-12,55;CL:0000393,5.67e-10,61;CL:0000211,5.67e-10,61;CL:0000192,5.65e-09,43;CL:0000514,5.65e-09,43;CL:0000048,2.12e-08,427;CL:0000723,3.74e-08,433;CL:0000359,7.83e-08,32;CL:0000222,8.04e-08,121;CL:0002321,1.62e-07,250;CL:0000034,2.17e-07,441;CL:0002556,2.38e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000355;6.55e-08;58!CL:0000514;3.85e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;6.13e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.97e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.92e-22!83;UBERON:0002329!7.92e-22!83;UBERON:0003077!7.92e-22!83;UBERON:0003059!7.92e-22!83;UBERON:0007282!7.92e-22!83;UBERON:0009618!7.92e-22!83;UBERON:0007285!7.92e-22!83;UBERON:0000475!2.50e-18!365;UBERON:0004290!1.86e-17!70;UBERON:0000486!1.28e-16!82;UBERON:0003102!1.28e-15!95;UBERON:0005256!3.60e-14!143;UBERON:0001134!8.03e-14!61;UBERON:0002036!8.03e-14!61;UBERON:0003082!8.03e-14!61;UBERON:0002385!3.15e-13!63;UBERON:0001015!3.15e-13!63;UBERON:0000383!3.15e-13!63;UBERON:0002100!2.03e-12!216;UBERON:0002097!1.01e-10!40;UBERON:0000481!6.48e-10!347;UBERON:0002199!6.68e-10!45;UBERON:0002416!6.68e-10!45;UBERON:0000119!7.67e-10!312;UBERON:0000483!1.70e-09!309;UBERON:0001637!9.00e-09!42;UBERON:0003509!9.00e-09!42;UBERON:0004572!9.00e-09!42;UBERON:0000490!1.01e-08!138;UBERON:0004573!2.87e-08!33;UBERON:0004571!2.87e-08!33;UBERON:0002049!3.37e-08!79;UBERON:0007798!3.37e-08!79;UBERON:0003104!3.51e-07!238;UBERON:0009142!3.51e-07!238;UBERON:0004872!3.57e-07!84;UBERON:0001981!8.52e-07!60;UBERON:0007500!8.52e-07!60;UBERON:0004537!8.52e-07!60;UBERON:0006965!8.52e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.06e-08;41!UBERON:0001758;2.38e-07;6!UBERON:0003672;2.38e-07;6!UBERON:0002199;2.68e-07;46!UBERON:0002416;2.68e-07;46!UBERON:0000075;2.90e-07;16!UBERON:0002067;5.57e-07;9!UBERON:0002384;1.00e-06;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.54e-16,71;UBERON:0003059,1.54e-16,71;UBERON:0007282,1.54e-16,71;UBERON:0004290,1.54e-16,71;UBERON:0009618,1.54e-16,71;UBERON:0003077,4.34e-16,72;UBERON:0007285,4.34e-16,72;UBERON:0007524,1.19e-15,73;UBERON:0007503,3.94e-15,78;UBERON:0000486,1.59e-13,83;UBERON:0003102,1.64e-12,99;UBERON:0001134,4.11e-12,62;UBERON:0002036,4.11e-12,62;UBERON:0003082,4.11e-12,62;UBERON:0002385,2.38e-11,64;UBERON:0001015,2.38e-11,64;UBERON:0000383,2.38e-11,64;UBERON:0002097,4.50e-11,41;UBERON:0005256,5.52e-10,122;UBERON:0002199,1.40e-09,46;UBERON:0002416,1.40e-09,46;UBERON:0000490,3.24e-08,148;UBERON:0000075,2.27e-07,16;UBERON:0001758,2.38e-07,6;UBERON:0003672,2.38e-07,6;UBERON:0011137,2.74e-07,14;UBERON:0003104,5.80e-07,160;UBERON:0009142,5.80e-07,160 | |||
|phase1_expression=0.908391896352783,0.642301571672949,1.26858963686374,1.0007329835313,0,0,0,0.631719873426831,0,1.22866968250754,0,0,0,4.82688776544182,0.994192127183747,1.34465029290355,4.82155622419182,0.730310090387373,0.487932798790507,0.984968464614303,1.02000345622126,0.313454721478088,2.0036519099174,1.77936752594749,0.753255837568817,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.12786256184353,0.722878304769133,0.50133791063589,0.579386075843295,7.15757352345989,3.89307896242109,2.55244006342983,1.77383517970051,1.58102614247627,0,0,0.370784442784429,0,0,0,0,0,0,1.39133685156694,0,0.694281003215189,0.56530794192401,0,0,0.626984899610432,0,1.06729878806013,0,0,0,0,0.735326160691737,0.81014194788176,0.982297011124877,0.44905874525234,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0,6.46063537203914,3.16576279161449,14.6974190702673,4.30254931123221,4.61068896857864,5.04609840128076,0,0.74000264525148,2.17847724779836,1.48181739276657,0.980771418680752,0.454072282934794,0.576175924479999,1.64025002283658,1.24864030732128,3.4228309292667,1.04614076386261,6.81120092133836,5.17993421978021,4.9157782345787,12.6575586178034,7.00155608677077,6.50952421407322,3.56400857184616,3.4617370098998,0,2.15585442544872,6.56510844420858,8.88341491090946,11.0825646193673,9.2185300384976,7.66219489497549,2.25357088359895,1.02088964844019,10.5839885056429,2.77624605464138,2.11931901159562,5.70173082560364,5.04957393268351,8.75977836155139,6.14185625894246,7.59493495085698,3.31285817548075,3.02920529092937,4.05019554026117,2.90962902273861,3.19508633264953,1.81353776809752,3.73033303083073,0.57978255948989,0.545492241181669,0.860413786167011,0,0,0,0,0,0,3.12899064659632,1.28648187638577,1.38134921352481,0.928735856063958,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88724591328378,0.329250856225877,2.24803506515239,0.603173834469785,0.370353780634118,1.62904152655162,3.11980435583874,2.88662684050547,1.15930404975077,1.17408694235822,0.144366447761074,0,0,0,0,0,0,0,1.87467667973554,0.335964256397719,1.13420077793909,2.7763142037883,2.3250715081117,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0.308482478109971,0.600686115687835,0.285826432630578,2.24262168690721,0,4.1069440059732,1.68053230485111,0,5.071816515336,2.39344304926383,0,1.54324424557285,1.41849132023278,1.0656887160644,1.14382394926518,0.542621605391443,1.64648067356154,0.977208552881205,0.710783897485092,0.791951872933429,3.01439377059586,4.35766729300147,1.59956785891291,0,0,0,2.63587341040741,0,2.85273810081437,2.17171960001369,4.31500277355805,1.79060963239896,0,0,0,0,0.254094624222463,1.30139853857622,0,0.837581326671744,0,0,0,0,3.80343624329334,4.50153468953709,3.52644530809656,4.15941723061614,8.20773348466944,4.57337003598411,4.33423235473039,1.80567659836631,0,0,3.98535359121262,0.921845842708516,4.17041349446798,0.195801157462741,0.343143423810856,0,0,0,0,0,0.604780586659361,1.48864684691266,1.2276957863045,0.561320188866147,2.43464383585832,0.511707249066704,0.321707842287215,0,0.462629081407967,1.24293207719189,0.739144404124282,2.59627214591811,0.348631135379878,0,0.802025881213139,0.184161977871793,3.3296189967736,5.64482620820823,1.44236856455367,0.902399225814824,0.616122696835318,0,0,0.211103257785751,0,0,2.15915916102139,0,1.08378575017541,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,1.02580050046556,0.328014645699706,0.650756789328606,0,0.366277859273374,0.41254749960294,0.574265537996172,0.650060246036521,1.6068392984416,1.25671933779759,5.69979883324184,2.30255512089194,3.1702411671442,4.0819693049944,1.59518363305651,2.04543905798642,0.445160178233687,0.330569830721956,0.192190067365106,2.16941611240793,0.10115778085555,1.39453664789186,4.7221852024596,1.3940745403212,1.23213432070436,0.532306030317022,1.73986598415015,2.22389062924704,3.57812216854978,2.232950216158,3.48017367190598,1.71567174531442,1.27948895655667,0.42793898803392,1.59101623962968,1.56989728039846,0.899362287916574,1.37268514868027,1.88499843753098,0.606547444719948,0,0.842516912477962,1.46290121726877,1.46228093778771,1.05650146756755,1.77449884830381,1.69686518344455,3.39024349860728,1.10273068709225,1.32687795048244,2.19225442626881,0,0.655894752046633,1.42037263873893,1.54911749049875,0.281695602532241,2.29458163526482,0.982490410131212,2.49669736036875,8.86902660176495,0,0.658589785919804,2.65631221636001,1.04980416073495,2.21310859268678,1.34060455107157,1.08890984861323,0,0,0,1.7737206141467,3.67557440331135,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0.284136146806413,0,0,0,0.994147647766298,0,1.22439575525196,0,2.74463030566391,0.19924798825107,0,0,3.06806047506464,0,3.42143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| ||
|short_description=p5@ENST00000533109 | |||
}} | }} |
Latest revision as of 19:17, 23 July 2015
Short description: | p5@ENST00000533109 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000533109_5end |
Coexpression cluster: | C1617_Fibroblast_meningioma_giant_Smooth_mesenchymal_hepatic_Olfactory |
Association with transcript: | -86bp_to_ENST00000533109_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.26e-24 | 76 |
skin fibroblast | 1.90e-16 | 23 |
muscle precursor cell | 8.05e-14 | 58 |
myoblast | 8.05e-14 | 58 |
multi-potent skeletal muscle stem cell | 8.05e-14 | 58 |
muscle cell | 2.70e-12 | 55 |
electrically responsive cell | 5.67e-10 | 61 |
electrically active cell | 5.67e-10 | 61 |
smooth muscle cell | 5.65e-09 | 43 |
smooth muscle myoblast | 5.65e-09 | 43 |
multi fate stem cell | 2.12e-08 | 427 |
somatic stem cell | 3.74e-08 | 433 |
vascular associated smooth muscle cell | 7.83e-08 | 32 |
mesodermal cell | 8.04e-08 | 121 |
embryonic cell | 1.62e-07 | 250 |
stem cell | 2.17e-07 | 441 |
fibroblast of periodontium | 2.38e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
somite | 1.54e-16 | 71 |
presomitic mesoderm | 1.54e-16 | 71 |
presumptive segmental plate | 1.54e-16 | 71 |
dermomyotome | 1.54e-16 | 71 |
trunk paraxial mesoderm | 1.54e-16 | 71 |
paraxial mesoderm | 4.34e-16 | 72 |
presumptive paraxial mesoderm | 4.34e-16 | 72 |
dense mesenchyme tissue | 1.19e-15 | 73 |
epithelial vesicle | 3.94e-15 | 78 |
multilaminar epithelium | 1.59e-13 | 83 |
surface structure | 1.64e-12 | 99 |
skeletal muscle tissue | 4.11e-12 | 62 |
striated muscle tissue | 4.11e-12 | 62 |
myotome | 4.11e-12 | 62 |
muscle tissue | 2.38e-11 | 64 |
musculature | 2.38e-11 | 64 |
musculature of body | 2.38e-11 | 64 |
skin of body | 4.50e-11 | 41 |
trunk mesenchyme | 5.52e-10 | 122 |
integument | 1.40e-09 | 46 |
integumental system | 1.40e-09 | 46 |
unilaminar epithelium | 3.24e-08 | 148 |
subdivision of skeletal system | 2.27e-07 | 16 |
periodontium | 2.38e-07 | 6 |
dentition | 2.38e-07 | 6 |
axial skeletal system | 2.74e-07 | 14 |
mesenchyme | 5.80e-07 | 160 |
entire embryonic mesenchyme | 5.80e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.97e-08 | 14 |