FFCP PHASE1:Hg19::chr11:123461510..123461537,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:123461510..123461537,+ | |||
|coexpression_cluster_id=C794 | |||
|description=CAGE_peak_at_chr11:123461510..123461537,+ | |description=CAGE_peak_at_chr11:123461510..123461537,+ | ||
|id=chr11:123461510..123461537,+ | |id=chr11:123461510..123461537,+ | ||
|ontology_enrichment_celltype=CL:0000159!4.80e-08!2 | |ontology_enrichment_celltype=CL:0000159!4.80e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000650;2.77e-08;2!CL:1000500;2.77e-08;2!CL:1000618;2.77e-08;2!CL:1001318;2.77e-08;2!CL:0002173;2.77e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,3.08e-08,2;CL:1000500,3.08e-08,2;CL:1000618,3.08e-08,2;CL:1001318,3.08e-08,2;CL:0002173,3.08e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;6.93e-16;1!UBERON:0009497;1.87e-10;13 | |||
|ontology_enrichment_disease=DOID:299!2.91e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;1.98e-09;25!DOID:3493;1.20e-08;2!DOID:4929;2.31e-08;2!DOID:4468;2.77e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,2.03e-09,25;DOID:3493,1.20e-08,2;DOID:4929,2.31e-08,2;DOID:4468,2.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0003127!2.90e-08!2;UBERON:0009497!4.64e-08!25;UBERON:0000015!4.64e-08!25;UBERON:0002423!4.64e-08!25;UBERON:0006235!4.64e-08!25;UBERON:0004161!4.64e-08!25;UBERON:0004921!3.49e-07!129;UBERON:0004185!3.49e-07!129;UBERON:0008835!4.36e-07!22;UBERON:0003894!4.36e-07!22;UBERON:0009854!9.77e-07!23 | |ontology_enrichment_uberon=UBERON:0003127!2.90e-08!2;UBERON:0009497!4.64e-08!25;UBERON:0000015!4.64e-08!25;UBERON:0002423!4.64e-08!25;UBERON:0006235!4.64e-08!25;UBERON:0004161!4.64e-08!25;UBERON:0004921!3.49e-07!129;UBERON:0004185!3.49e-07!129;UBERON:0008835!4.36e-07!22;UBERON:0003894!4.36e-07!22;UBERON:0009854!9.77e-07!23 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;3.62e-26;4!UBERON:0002114;8.66e-20;2!UBERON:0002294;8.04e-19;7!UBERON:0001173;8.04e-19;7!UBERON:0005409;1.79e-15;22!UBERON:0004913;2.06e-15;1!UBERON:0003703;2.06e-15;1!UBERON:0001174;2.06e-15;1!UBERON:0004914;2.06e-15;1!UBERON:0002394;5.83e-15;4!UBERON:0003928;5.83e-15;4!UBERON:0000160;5.77e-13;17!UBERON:0004921;1.45e-09;33!UBERON:0002423;2.31e-09;25!UBERON:0003567;2.77e-08;2!UBERON:0003838;2.77e-08;2!UBERON:0003586;2.77e-08;2!UBERON:0005169;2.77e-08;2!UBERON:0002321;2.77e-08;2!UBERON:0005215;2.77e-08;2!UBERON:0002303;2.77e-08;2!UBERON:0002319;2.77e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.32e-26,4;UBERON:0002114,7.88e-20,2;UBERON:0004913,2.06e-15,1;UBERON:0003703,2.06e-15,1;UBERON:0001174,2.06e-15,1;UBERON:0004914,2.06e-15,1;UBERON:0002294,7.89e-15,9;UBERON:0001173,7.89e-15,9;UBERON:0004912,7.89e-15,9;UBERON:0005409,1.05e-13,25;UBERON:0000160,5.60e-13,17;UBERON:0002394,2.52e-10,6;UBERON:0003928,2.52e-10,6;UBERON:0009497,2.26e-09,25;UBERON:0000015,2.26e-09,25;UBERON:0002423,2.26e-09,25;UBERON:0006235,2.26e-09,25;UBERON:0004161,2.26e-09,25;UBERON:0003567,3.08e-08,2;UBERON:0003838,3.08e-08,2;UBERON:0003586,3.08e-08,2;UBERON:0005169,3.08e-08,2;UBERON:0002321,3.08e-08,2;UBERON:0005215,3.08e-08,2;UBERON:0002303,3.08e-08,2;UBERON:0002319,3.08e-08,2;UBERON:0000058,3.29e-07,19;UBERON:0001007,5.37e-07,145;UBERON:0001555,5.37e-07,145;UBERON:0007026,5.37e-07,145;UBERON:0004921,6.40e-07,118 | |||
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| ||
|short_description=p@chr11:123461510..123461537,+ | |short_description=p@chr11:123461510..123461537,+ | ||
}} | }} |
Latest revision as of 19:26, 23 July 2015
Short description: | p@chr11:123461510..123461537, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:123461510..123461537, + |
Coexpression cluster: | C794_small_signet_adenocarcinoma_colon_Hepatocyte_gall_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 3.08e-08 | 2 |
kidney interstitial cell | 3.08e-08 | 2 |
juxtaglomerular complex cell | 3.08e-08 | 2 |
renal interstitial pericyte | 3.08e-08 | 2 |
extraglomerular mesangial cell | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 3.32e-26 | 4 |
duodenum | 7.88e-20 | 2 |
hepatopancreatic ampulla | 2.06e-15 | 1 |
extrahepatic bile duct | 2.06e-15 | 1 |
common bile duct | 2.06e-15 | 1 |
duodenal papilla | 2.06e-15 | 1 |
biliary system | 7.89e-15 | 9 |
biliary tree | 7.89e-15 | 9 |
biliary bud | 7.89e-15 | 9 |
gastrointestinal system | 1.05e-13 | 25 |
intestine | 5.60e-13 | 17 |
bile duct | 2.52e-10 | 6 |
digestive system duct | 2.52e-10 | 6 |
epithelium of foregut-midgut junction | 2.26e-09 | 25 |
anatomical boundary | 2.26e-09 | 25 |
hepatobiliary system | 2.26e-09 | 25 |
foregut-midgut junction | 2.26e-09 | 25 |
septum transversum | 2.26e-09 | 25 |
abdomen connective tissue | 3.08e-08 | 2 |
abdominal segment connective tissue | 3.08e-08 | 2 |
trunk connective tissue | 3.08e-08 | 2 |
interstitial tissue | 3.08e-08 | 2 |
extraglomerular mesangium | 3.08e-08 | 2 |
kidney interstitium | 3.08e-08 | 2 |
juxtaglomerular apparatus | 3.08e-08 | 2 |
mesangium | 3.08e-08 | 2 |
duct | 3.29e-07 | 19 |
digestive system | 5.37e-07 | 145 |
digestive tract | 5.37e-07 | 145 |
primitive gut | 5.37e-07 | 145 |
subdivision of digestive tract | 6.40e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 2.03e-09 | 25 |
signet ring cell adenocarcinoma | 1.20e-08 | 2 |
tubular adenocarcinoma | 2.31e-08 | 2 |
clear cell adenocarcinoma | 2.87e-08 | 2 |