FFCP PHASE1:Hg19::chr11:127965855..127965866,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:127965855..127965866,+ | |||
|coexpression_cluster_id=C195 | |||
|description=CAGE_peak_at_chr11:127965855..127965866,+ | |description=CAGE_peak_at_chr11:127965855..127965866,+ | ||
|id=chr11:127965855..127965866,+ | |id=chr11:127965855..127965866,+ | ||
|ontology_enrichment_celltype=CL:0002368!3.67e-33!13;CL:0000244!6.84e-19!4;CL:0000731!6.84e-19!4;CL:0002202!1.65e-17!9;CL:0002632!1.65e-17!9;CL:0002076!9.24e-15!43;CL:0000068!2.89e-14!3;CL:0000069!2.89e-14!3;CL:0000307!2.89e-14!3;CL:0000377!2.89e-14!3;CL:0002328!4.50e-14!3;CL:0000223!1.15e-11!59;CL:0002057!3.41e-08!42;CL:0000860!1.58e-07!45;CL:0002573!4.47e-07!2 | |ontology_enrichment_celltype=CL:0002368!3.67e-33!13;CL:0000244!6.84e-19!4;CL:0000731!6.84e-19!4;CL:0002202!1.65e-17!9;CL:0002632!1.65e-17!9;CL:0002076!9.24e-15!43;CL:0000068!2.89e-14!3;CL:0000069!2.89e-14!3;CL:0000307!2.89e-14!3;CL:0000377!2.89e-14!3;CL:0002328!4.50e-14!3;CL:0000223!1.15e-11!59;CL:0002057!3.41e-08!42;CL:0000860!1.58e-07!45;CL:0002573!4.47e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000244;1.22e-56;4!CL:0000731;1.22e-56;4!CL:0002368;4.37e-39;13!CL:0000307;1.05e-19;3!CL:0002202;1.10e-14;9!CL:0002632;1.10e-14;9!CL:0002076;1.83e-13;42!CL:0002589;2.31e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.06e-56,4;CL:0000731,1.06e-56,4;CL:0002368,3.14e-39,13;CL:0000068,1.05e-19,3;CL:0000069,1.05e-19,3;CL:0000307,1.05e-19,3;CL:0000377,1.05e-19,3;CL:0002076,3.54e-16,42;CL:0002202,9.09e-15,9;CL:0002632,9.09e-15,9;CL:0000223,1.39e-11,58;CL:0002589,2.67e-08,2;CL:0000066,8.56e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000377;1.05e-19;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!1.97e-22!5;UBERON:0005910!1.19e-18!6;UBERON:0004815!4.50e-14!3;UBERON:0002031!4.50e-14!3;UBERON:0007196!5.07e-11!14;UBERON:0001558!5.07e-11!14;UBERON:0002185!1.14e-10!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.99e-45;5!UBERON:0005910;6.02e-38;6!UBERON:0000486;3.39e-19;12!UBERON:0007196;4.74e-09;15!UBERON:0001558;4.74e-09;15!UBERON:0003126;5.37e-09;7!UBERON:0001005;5.37e-09;7!UBERON:0000065;1.38e-08;44!UBERON:0001529;2.31e-08;2!UBERON:0007204;2.31e-08;2!UBERON:0006554;7.56e-08;30!UBERON:0001008;7.56e-08;30!UBERON:0005911;2.84e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.78e-45,5;UBERON:0005910,5.48e-38,6;UBERON:0000065,2.75e-09,54;UBERON:0007196,4.24e-09,15;UBERON:0001558,4.24e-09,15;UBERON:0003126,5.37e-09,7;UBERON:0001005,5.37e-09,7;UBERON:0001529,2.67e-08,2;UBERON:0007204,2.67e-08,2;UBERON:0004119,8.32e-08,160;UBERON:0000925,8.32e-08,160;UBERON:0006595,8.32e-08,160 | |||
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| ||
|short_description=p@chr11:127965855..127965866,+ | |short_description=p@chr11:127965855..127965866,+ | ||
}} | }} |
Latest revision as of 19:50, 23 July 2015
Short description: | p@chr11:127965855..127965866, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:127965855..127965866, + |
Coexpression cluster: | C195_Small_Gingival_Bronchial_Smooth_mesenchymal_Urothelial_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.06e-56 | 4 |
urothelial cell | 1.06e-56 | 4 |
respiratory epithelial cell | 3.14e-39 | 13 |
duct epithelial cell | 1.05e-19 | 3 |
branched duct epithelial cell | 1.05e-19 | 3 |
tracheal epithelial cell | 1.05e-19 | 3 |
tracheoblast | 1.05e-19 | 3 |
endo-epithelial cell | 3.54e-16 | 42 |
epithelial cell of tracheobronchial tree | 9.09e-15 | 9 |
epithelial cell of lower respiratory tract | 9.09e-15 | 9 |
endodermal cell | 1.39e-11 | 58 |
smooth muscle cell of the brachiocephalic vasculature | 2.67e-08 | 2 |
epithelial cell | 8.56e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.78e-45 | 5 |
transitional epithelium | 5.48e-38 | 6 |
respiratory tract | 2.75e-09 | 54 |
tracheobronchial tree | 4.24e-09 | 15 |
lower respiratory tract | 4.24e-09 | 15 |
trachea | 5.37e-09 | 7 |
respiratory airway | 5.37e-09 | 7 |
brachiocephalic artery | 2.67e-08 | 2 |
brachiocephalic vasculature | 2.67e-08 | 2 |
endoderm-derived structure | 8.32e-08 | 160 |
endoderm | 8.32e-08 | 160 |
presumptive endoderm | 8.32e-08 | 160 |