FFCP PHASE1:Hg19::chr11:16125602..16125625,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:16125602..16125625,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_at_chr11:16125602..16125625,- | |||
|id=chr11:16125602..16125625,- | |||
|ontology_enrichment_celltype=CL:0002563!2.71e-10!4;CL:0000764!1.27e-09!2;CL:0000765!1.27e-09!2;CL:0000050!1.27e-09!2;CL:0000038!1.27e-09!2;CL:0000558!1.27e-09!2;CL:0000547!1.27e-09!2;CL:0000549!1.27e-09!2;CL:0000550!1.27e-09!2;CL:0000552!1.27e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0002563;3.26e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.80e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!2.86e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:171;3.05e-36;10!DOID:3095;5.13e-17;22!DOID:2994;5.13e-17;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.05e-36,10;DOID:3095,5.13e-17,22;DOID:2994,5.13e-17,22 | |||
|ontology_enrichment_uberon=UBERON:0001950!1.85e-11!20;UBERON:0002346!9.41e-11!90;UBERON:0002619!2.37e-10!22;UBERON:0001242!2.71e-10!4;UBERON:0001262!2.71e-10!4;UBERON:0004786!2.71e-10!4;UBERON:0004808!2.71e-10!4;UBERON:0001277!2.71e-10!4;UBERON:0001893!6.75e-10!34;UBERON:0000956!5.17e-09!25;UBERON:0000203!5.17e-09!25;UBERON:0000160!1.11e-08!27;UBERON:0001869!1.38e-08!32;UBERON:0002791!2.54e-08!33;UBERON:0003350!2.56e-08!5;UBERON:0001872!4.00e-08!5;UBERON:0002020!4.85e-08!34;UBERON:0003528!4.85e-08!34;UBERON:0002780!6.05e-08!41;UBERON:0001890!6.05e-08!41;UBERON:0006240!6.05e-08!41;UBERON:0001049!9.68e-08!57;UBERON:0005068!9.68e-08!57;UBERON:0006241!9.68e-08!57;UBERON:0007135!9.68e-08!57;UBERON:0003080!1.02e-07!42;UBERON:0007023!2.21e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;1.46e-125;5!UBERON:0005423;1.46e-125;5!UBERON:0002346;7.72e-89;4!UBERON:0000923;7.72e-89;4!UBERON:0010316;7.72e-89;4!UBERON:0005291;7.72e-89;4!UBERON:0005795;1.81e-40;1!UBERON:0001242;3.26e-11;4!UBERON:0001262;3.26e-11;4!UBERON:0004786;3.26e-11;4!UBERON:0004808;3.26e-11;4!UBERON:0001277;3.26e-11;4!UBERON:0000922;7.52e-09;49!UBERON:0000485;5.86e-07;7!UBERON:0003929;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.80e-11,4;UBERON:0001262,2.80e-11,4;UBERON:0004786,2.80e-11,4;UBERON:0004808,2.80e-11,4;UBERON:0001277,2.80e-11,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0.216388639742091,0.995261931078505,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69732529954025,4.03892348193197,1.73510069962603,0.558644917973244,0,0,0,0,1.8374728641192,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0.183428598521679,0,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0.206686796501184,0,0.546974809018219,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22068853494722,0,0,0 | |||
|short_description=p@chr11:16125602..16125625,- | |||
}} |
Latest revision as of 20:22, 23 July 2015
Short description: | p@chr11:16125602..16125625, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:16125602..16125625, - |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.80e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.80e-11 | 4 |
wall of intestine | 2.80e-11 | 4 |
gastrointestinal system mucosa | 2.80e-11 | 4 |
gastrointestinal system epithelium | 2.80e-11 | 4 |
intestinal epithelium | 2.80e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.05e-36 | 10 |
germ cell and embryonal cancer | 5.13e-17 | 22 |
germ cell cancer | 5.13e-17 | 22 |