FFCP PHASE1:Hg19::chr11:46342339..46342359,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:46342339..46342359,+ | |||
|coexpression_cluster_id=C882 | |coexpression_cluster_id=C882 | ||
|description=CAGE_peak_at_chr11:46342339..46342359,+ | |description=CAGE_peak_at_chr11:46342339..46342359,+ | ||
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|ontology_enrichment_celltype=CL:0000055!1.39e-37!180;CL:0000057!1.59e-26!75;CL:0000680!1.33e-13!57;CL:0000056!1.33e-13!57;CL:0000355!1.33e-13!57;CL:0000187!3.92e-13!54;CL:0000183!1.64e-12!59;CL:0002620!1.54e-11!23;CL:0000192!1.55e-11!42;CL:0000514!1.55e-11!42;CL:0000393!5.75e-10!60;CL:0000211!5.75e-10!60;CL:0000359!9.40e-08!32;CL:0000048!6.18e-07!430;CL:0002334!9.21e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.39e-37!180;CL:0000057!1.59e-26!75;CL:0000680!1.33e-13!57;CL:0000056!1.33e-13!57;CL:0000355!1.33e-13!57;CL:0000187!3.92e-13!54;CL:0000183!1.64e-12!59;CL:0002620!1.54e-11!23;CL:0000192!1.55e-11!42;CL:0000514!1.55e-11!42;CL:0000393!5.75e-10!60;CL:0000211!5.75e-10!60;CL:0000359!9.40e-08!32;CL:0000048!6.18e-07!430;CL:0002334!9.21e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000134;7.06e-12;55!CL:0002620;1.68e-11;23!CL:0000057;2.56e-11;73!CL:0000048;4.25e-11;58!CL:0000723;7.28e-10;61!CL:0002320;2.52e-09;188!CL:0000192;8.79e-09;43!CL:0002334;2.06e-08;12!CL:0000034;1.45e-07;69!CL:0000499;6.43e-07;28!CL:0002570;8.27e-07;8!CL:0000187;9.37e-07;55 | |ontology_enrichment_celltype_v019=CL:0000134;7.06e-12;55!CL:0002620;1.68e-11;23!CL:0000057;2.56e-11;73!CL:0000048;4.25e-11;58!CL:0000723;7.28e-10;61!CL:0002320;2.52e-09;188!CL:0000192;8.79e-09;43!CL:0002334;2.06e-08;12!CL:0000034;1.45e-07;69!CL:0000499;6.43e-07;28!CL:0002570;8.27e-07;8!CL:0000187;9.37e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.72e-29,76;CL:0000048,1.21e-17,427;CL:0000723,1.07e-16,433;CL:0000034,1.75e-15,441;CL:0000680,3.53e-12,58;CL:0000056,3.53e-12,58;CL:0000355,3.53e-12,58;CL:0000187,4.74e-12,55;CL:0000192,1.15e-11,43;CL:0000514,1.15e-11,43;CL:0002620,1.80e-11,23;CL:0000393,1.05e-09,61;CL:0000211,1.05e-09,61;CL:0002320,1.10e-09,361;CL:0000134,5.76e-09,354;CL:0002334,1.69e-08,12;CL:0000219,1.93e-07,386;CL:0002570,4.58e-07,8;CL:0000222,6.71e-07,121;CL:0000499,7.36e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;8.79e-09;43!CL:0000355;7.50e-07;58 | |ontology_enrichment_development_v019=CL:0000514;8.79e-09;43!CL:0000355;7.50e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;7.79e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;7.79e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,6.47e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.71e-16!83;UBERON:0002329!9.71e-16!83;UBERON:0003077!9.71e-16!83;UBERON:0003059!9.71e-16!83;UBERON:0007282!9.71e-16!83;UBERON:0009618!9.71e-16!83;UBERON:0007285!9.71e-16!83;UBERON:0005256!6.43e-14!143;UBERON:0004290!1.10e-13!70;UBERON:0002385!6.15e-13!63;UBERON:0001015!6.15e-13!63;UBERON:0000383!6.15e-13!63;UBERON:0001134!7.20e-13!61;UBERON:0002036!7.20e-13!61;UBERON:0003082!7.20e-13!61;UBERON:0000486!9.36e-12!82;UBERON:0003102!2.10e-10!95;UBERON:0000475!9.47e-10!365;UBERON:0002100!1.89e-08!216;UBERON:0002199!2.85e-08!45;UBERON:0002416!2.85e-08!45;UBERON:0000481!3.89e-07!347;UBERON:0002097!7.69e-07!40;UBERON:0001013!9.79e-07!14 | |ontology_enrichment_uberon=UBERON:0000914!9.71e-16!83;UBERON:0002329!9.71e-16!83;UBERON:0003077!9.71e-16!83;UBERON:0003059!9.71e-16!83;UBERON:0007282!9.71e-16!83;UBERON:0009618!9.71e-16!83;UBERON:0007285!9.71e-16!83;UBERON:0005256!6.43e-14!143;UBERON:0004290!1.10e-13!70;UBERON:0002385!6.15e-13!63;UBERON:0001015!6.15e-13!63;UBERON:0000383!6.15e-13!63;UBERON:0001134!7.20e-13!61;UBERON:0002036!7.20e-13!61;UBERON:0003082!7.20e-13!61;UBERON:0000486!9.36e-12!82;UBERON:0003102!2.10e-10!95;UBERON:0000475!9.47e-10!365;UBERON:0002100!1.89e-08!216;UBERON:0002199!2.85e-08!45;UBERON:0002416!2.85e-08!45;UBERON:0000481!3.89e-07!347;UBERON:0002097!7.69e-07!40;UBERON:0001013!9.79e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;3.56e-09;198!UBERON:0001013;4.66e-07;14!UBERON:0003104;6.57e-07;7!UBERON:0009142;6.57e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0002384;3.56e-09;198!UBERON:0001013;4.66e-07;14!UBERON:0003104;6.57e-07;7!UBERON:0009142;6.57e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.29e-11,62;UBERON:0002036,2.29e-11,62;UBERON:0003082,2.29e-11,62;UBERON:0007524,4.49e-11,73;UBERON:0002329,7.43e-11,71;UBERON:0003059,7.43e-11,71;UBERON:0007282,7.43e-11,71;UBERON:0004290,7.43e-11,71;UBERON:0009618,7.43e-11,71;UBERON:0002385,1.28e-10,64;UBERON:0001015,1.28e-10,64;UBERON:0000383,1.28e-10,64;UBERON:0003077,1.61e-10,72;UBERON:0007285,1.61e-10,72;UBERON:0002384,8.59e-10,371;UBERON:0007503,2.07e-09,78;UBERON:0002199,5.04e-09,46;UBERON:0002416,5.04e-09,46;UBERON:0000486,9.00e-09,83;UBERON:0003102,9.13e-09,99;UBERON:0005256,3.79e-08,122;UBERON:0002097,1.42e-07,41;UBERON:0001013,2.38e-07,14 | |||
|phase1_expression=1.45342703416445,5.35251309727458,3.66481450649525,2.00146596706261,3.12872766099101,5.23403114460221,5.06599756336621,1.89515962028049,0.261185628199839,1.47440361900905,0,2.62129646556207,1.05506791291381,1.60896258848061,0.994192127183747,2.01697543935533,2.41077811209591,2.92124036154949,0.975865597581014,0.861847406537515,0.612002073732759,1.56727360739044,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,1.02290049474824,5.42158728576849,2.00535164254356,5.35932120155048,0.795285947051099,1.45990461090791,0.189069634328136,0.443458794925128,0.527008714158756,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,4.47274756525787,2.40597972162702,0.794455084879313,2.86836620748814,3.90135220418193,1.12135520028461,2.1349799145941,3.94668077467456,0.311211035399766,0.538842688278752,0.653847612453835,2.72443369760877,2.88087962239999,4.45210720484214,0.312160076830321,0.570471821544449,1.34503812496621,0.939475989150119,0.647491777472526,1.26405726032024,2.04154171254893,1.71968044236475,3.30642499762449,4.75201142912821,6.42894016124248,8.19145225744224,7.18618141816238,0.673344455816265,1.50142223846357,2.49357703935765,3.07284334616587,3.0648779579902,1.95309476578576,1.58805056424029,10.404598869954,9.1829677191984,6.56988893594642,6.00182192168805,5.66788910811414,5.41045134095821,8.00302482225836,7.42615861861571,5.65134629934952,4.54380793639406,4.41839513483037,10.1837015795851,9.9402685904652,6.04512589365842,6.61286310010902,0,0.272746120590835,0,0.243947412259191,0,0.348581828608555,0.310983165046111,0.252320850875628,0,1.56449532329816,3.85944562915731,0,2.3218396401599,1.44375896333917,0,0,0,0,0,0,0.134831308160164,0,0,0,2.80483547606892,2.8810180793198,4.41026134156626,0,0,0,0,1.10689594688802,2.05881372358231,0,0,0,0.185176890317059,3.9096996637239,1.03993478527958,0,1.04337364477569,1.40890433082986,0.144366447761074,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,1.23344192779897,1.30788020649984,1.24675085895615,3.74887975697556,10.7296933755565,3.381211010224,7.97814349754611,5.2003718455683,3.60090323966999,2.83698264046557,1.8649552531127,7.72081165753997,16.8212697671347,4.11620168390384,1.62868092146868,2.48774364119782,1.58390374586686,0.301439377059586,0,1.49959486773086,0,0,0,8.38686994220539,11.4861935834114,0,1.15825045334063,1.64381058040307,0.537182889719687,0,0,0,0,1.77866236955724,0,0,0,0,0,0,0,1.59498939234882,1.00034104211935,0.542530047399471,7.90289273817067,11.9547422494098,7.09660867652706,4.33423235473039,1.20378439891088,0,2.0694614258501,12.6202863721733,0.921845842708516,3.12781012085098,1.37060810223918,1.71571711905428,0,0,0,0,18.3078983461547,4.83824469327489,4.21783273291921,2.455391572609,3.64858122762996,3.07533958213682,1.53512174720011,10.4555048743345,1.48418066444991,5.24312958929029,2.13074070375753,3.53146770859379,6.23105315020345,1.97557643381931,0.604297247958111,0.200506470303285,0.460404944679482,5.85553685639494,6.55528204824181,8.78533580228142,0.451199612907412,0.0770153371044148,0,0,0.316654886678627,0,0,0.647747748306418,3.08454505380579,0.541892875087706,0,0.254876273045038,0,0,0,0,0.769350375349168,0.984043937099117,1.62689197332152,0,7.87497397437753,4.37300349579116,1.72279661398852,0,4.82051789532479,2.22342652071881,0.462145851343933,0.460511024178389,0.413509717453592,2.14840489736547,0.580066775656914,1.19317278382541,6.49933860221183,0,0,0.127612712494584,0,12.5508298310267,14.4813679542094,0.6970372701606,2.7723022215848,2.66153015158511,0,1.29726953372744,0,0.372158369359667,0.632758849437452,1.71567174531442,2.303080121802,3.85145089230528,0.636406495851874,3.92474320099615,1.97859703341646,2.19629623788844,1.7671860351853,1.61745985258653,0,1.26377536871694,3.41343617362713,2.19342140668156,4.22600587027022,8.73599433011109,12.4436780119267,3.39024349860728,2.75682671773062,1.32687795048244,3.06915619677634,4.6302042741335,1.31178950409327,1.42037263873893,1.54911749049875,0.281695602532241,5.30622003154991,2.25972794330179,0.7133421029625,1.41904425628239,3.16661452946496,4.28083360847872,3.03578539012572,3.14941248220485,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0.276283915531148,0,1.22722419002586,0.123084805461069,4.0435146396035,0,0.716084698702437,0,0.591860433821602,0,0,0,0,0,0,0.524759999977174,0,0,0,0,0,0,0.694499979733169,0,0,0,0,0,0,0,0,1.00035336054936,1.59518878185802,0,0,0.54323685961004,0,0.732780747214898,0,0,0,0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| ||
|short_description=p@chr11:46342339..46342359,+ | |short_description=p@chr11:46342339..46342359,+ | ||
}} | }} |
Latest revision as of 22:25, 23 July 2015
Short description: | p@chr11:46342339..46342359, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:46342339..46342359, + |
Coexpression cluster: | C882_Olfactory_Mesenchymal_Smooth_tenocyte_Osteoblast_Prostate_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.72e-29 | 76 |
multi fate stem cell | 1.21e-17 | 427 |
somatic stem cell | 1.07e-16 | 433 |
stem cell | 1.75e-15 | 441 |
muscle precursor cell | 3.53e-12 | 58 |
myoblast | 3.53e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.53e-12 | 58 |
muscle cell | 4.74e-12 | 55 |
smooth muscle cell | 1.15e-11 | 43 |
smooth muscle myoblast | 1.15e-11 | 43 |
skin fibroblast | 1.80e-11 | 23 |
electrically responsive cell | 1.05e-09 | 61 |
electrically active cell | 1.05e-09 | 61 |
connective tissue cell | 1.10e-09 | 361 |
mesenchymal cell | 5.76e-09 | 354 |
preadipocyte | 1.69e-08 | 12 |
motile cell | 1.93e-07 | 386 |
mesenchymal stem cell of adipose | 4.58e-07 | 8 |
mesodermal cell | 6.71e-07 | 121 |
stromal cell | 7.36e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.29e-11 | 62 |
striated muscle tissue | 2.29e-11 | 62 |
myotome | 2.29e-11 | 62 |
dense mesenchyme tissue | 4.49e-11 | 73 |
somite | 7.43e-11 | 71 |
presomitic mesoderm | 7.43e-11 | 71 |
presumptive segmental plate | 7.43e-11 | 71 |
dermomyotome | 7.43e-11 | 71 |
trunk paraxial mesoderm | 7.43e-11 | 71 |
muscle tissue | 1.28e-10 | 64 |
musculature | 1.28e-10 | 64 |
musculature of body | 1.28e-10 | 64 |
paraxial mesoderm | 1.61e-10 | 72 |
presumptive paraxial mesoderm | 1.61e-10 | 72 |
connective tissue | 8.59e-10 | 371 |
epithelial vesicle | 2.07e-09 | 78 |
integument | 5.04e-09 | 46 |
integumental system | 5.04e-09 | 46 |
multilaminar epithelium | 9.00e-09 | 83 |
surface structure | 9.13e-09 | 99 |
trunk mesenchyme | 3.79e-08 | 122 |
skin of body | 1.42e-07 | 41 |
adipose tissue | 2.38e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.47e-07 | 14 |