FFCP PHASE1:Hg19::chr11:58869776..58869807,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:58869776..58869807,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_at_chr11:58869776..58869807,- | |description=CAGE_peak_at_chr11:58869776..58869807,- | ||
|id=chr11:58869776..58869807,- | |id=chr11:58869776..58869807,- | ||
|ontology_enrichment_celltype=CL:0000945!7.81e-34!24;CL:0000826!7.81e-34!24;CL:0000236!5.29e-22!14;CL:0000542!1.20e-12!53;CL:0000051!1.20e-12!53;CL:0000838!1.15e-11!52;CL:0002322!5.52e-09!5;CL:0000037!1.64e-08!172;CL:0000566!1.64e-08!172;CL:0002087!4.58e-08!119;CL:0000738!9.60e-08!140;CL:0000988!2.00e-07!182 | |ontology_enrichment_celltype=CL:0000945!7.81e-34!24;CL:0000826!7.81e-34!24;CL:0000236!5.29e-22!14;CL:0000542!1.20e-12!53;CL:0000051!1.20e-12!53;CL:0000838!1.15e-11!52;CL:0002322!5.52e-09!5;CL:0000037!1.64e-08!172;CL:0000566!1.64e-08!172;CL:0002087!4.58e-08!119;CL:0000738!9.60e-08!140;CL:0000988!2.00e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.44e-62;24!CL:0000236;4.58e-53;13!CL:0000542;3.19e-20;53!CL:0002322;1.05e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.09e-62,24;CL:0000826,1.09e-62,24;CL:0000236,1.55e-57,14;CL:0000542,3.62e-29,53;CL:0000051,3.62e-29,53;CL:0000838,1.32e-26,52;CL:0002087,6.62e-11,115;CL:0000785,7.59e-11,2;CL:0000955,7.59e-11,2;CL:0000818,7.59e-11,2;CL:0000954,7.59e-11,2;CL:0000816,7.59e-11,2;CL:0000738,1.19e-09,136;CL:0002031,4.68e-09,120;CL:0002322,1.54e-08,5;CL:0000817,1.69e-07,3;CL:0000037,5.38e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;3.19e-20;53!CL:0000954;7.04e-11;2!UBERON:0004872;8.38e-11;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.21e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.29e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.21e-07!15;UBERON:0000179!1.21e-07!15;UBERON:0000463!1.21e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.16e-14;3!UBERON:0004177;5.47e-09;5!UBERON:0005057;5.47e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.23e-15,3;UBERON:0004854,9.23e-15,3;UBERON:0009034,9.23e-15,3;UBERON:0002095,9.23e-15,3;UBERON:0004782,9.23e-15,3;UBERON:0003281,9.23e-15,3;UBERON:0009664,9.23e-15,3;UBERON:0002296,9.23e-15,3;UBERON:0005602,9.23e-15,3;UBERON:0001179,9.23e-15,3;UBERON:0006293,9.23e-15,3 | |||
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| ||
|short_description=p@chr11:58869776..58869807,- | |short_description=p@chr11:58869776..58869807,- | ||
}} | }} |
Latest revision as of 23:06, 23 July 2015
Short description: | p@chr11:58869776..58869807, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:58869776..58869807, - |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.09e-62 | 24 |
pro-B cell | 1.09e-62 | 24 |
B cell | 1.55e-57 | 14 |
lymphocyte | 3.62e-29 | 53 |
common lymphoid progenitor | 3.62e-29 | 53 |
lymphoid lineage restricted progenitor cell | 1.32e-26 | 52 |
nongranular leukocyte | 6.62e-11 | 115 |
mature B cell | 7.59e-11 | 2 |
pre-B-II cell | 7.59e-11 | 2 |
transitional stage B cell | 7.59e-11 | 2 |
small pre-B-II cell | 7.59e-11 | 2 |
immature B cell | 7.59e-11 | 2 |
leukocyte | 1.19e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 4.68e-09 | 120 |
embryonic stem cell | 1.54e-08 | 5 |
precursor B cell | 1.69e-07 | 3 |
hematopoietic stem cell | 5.38e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
spleen | 9.23e-15 | 3 |
gastrointestinal system mesentery | 9.23e-15 | 3 |
stomach region | 9.23e-15 | 3 |
mesentery | 9.23e-15 | 3 |
gastrointestinal system serosa | 9.23e-15 | 3 |
mesentery of stomach | 9.23e-15 | 3 |
gut mesentery | 9.23e-15 | 3 |
dorsal mesentery | 9.23e-15 | 3 |
dorsal mesogastrium | 9.23e-15 | 3 |
peritoneal cavity | 9.23e-15 | 3 |
spleen primordium | 9.23e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.29e-12 | 10 |