FFCP PHASE1:Hg19::chr11:60719765..60719782,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:60719765..60719782,-
|short_description=p@chr11:60719765..60719782,-
|description=CAGE_peak_at_chr11:60719765..60719782,-
|association_with_transcript=NA
...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:60719765..60719782,- | |||
|description=CAGE_peak_at_chr11:60719765..60719782,- | |||
|id=chr11:60719765..60719782,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.20e-10;3!CL:0000346;2.41e-10;3!CL:1000428;2.41e-10;3!CL:0000214;4.94e-10;3!CL:0000077;5.51e-09;19!CL:0002591;3.82e-08;1!CL:0002379;3.82e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.62e-10,3;CL:1000428,1.62e-10,3;CL:0002541,1.87e-10,3;CL:0000214,7.46e-10,3;CL:0000077,5.19e-09,19;CL:0002379,2.69e-08,1;CL:0002591,5.82e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.78e-09;1!UBERON:0001045;3.82e-08;1!UBERON:0004874;3.82e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;3.82e-08;1!DOID:3565;3.82e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.69e-08,1;DOID:3565,2.69e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-11!115;UBERON:0000475!5.38e-07!365;UBERON:0000481!6.88e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.20e-10;3!UBERON:0000920;2.20e-10;3!UBERON:0000412;2.41e-10;3!UBERON:0001992;2.41e-10;3!UBERON:0006915;4.94e-10;3!UBERON:0007616;4.94e-10;3!UBERON:0002217;4.94e-10;3!UBERON:0002018;4.94e-10;3!UBERON:0001154;3.82e-08;1!UBERON:0000989;3.82e-08;1!UBERON:0001153;3.82e-08;1!UBERON:0002171;3.82e-08;1!UBERON:0008811;3.82e-08;1!UBERON:0009854;3.82e-08;1!UBERON:0006518;3.82e-08;1!UBERON:0008949;3.82e-08;1!UBERON:0000101;3.82e-08;1!UBERON:0002167;3.82e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.62e-10,3;UBERON:0001992,1.62e-10,3;UBERON:0000920,1.87e-10,3;UBERON:0006915,7.46e-10,3;UBERON:0007616,7.46e-10,3;UBERON:0002217,7.46e-10,3;UBERON:0002018,7.46e-10,3;UBERON:0003124,8.01e-10,7;UBERON:0004923,7.61e-09,66;UBERON:0000989,2.02e-08,1;UBERON:0008811,2.02e-08,1;UBERON:0006258,2.02e-08,1;UBERON:0005876,2.02e-08,1;UBERON:0004874,2.02e-08,1;UBERON:0002171,4.41e-08,1;UBERON:0006518,4.41e-08,1;UBERON:0008949,4.41e-08,1;UBERON:0000101,4.41e-08,1;UBERON:0002167,4.41e-08,1;UBERON:0001154,6.24e-08,1;UBERON:0001153,6.24e-08,1;UBERON:0001045,6.24e-08,1 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.61560529038394,0,0,0.286235987131057,0.136874425072884,0.376627918784408,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.434539556882471,0,0.973269740605272,0.189069634328136,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,0,0,0,1.18800285728205,2.22540236350701,0,0,0,0,0,0.438977620880838,0.30648779579902,1.65261864797256,0,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.206105058476878,0,0.37223371266318,0,0,0,0.276149695926898,0.80823028409406,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,4.69348596989448,1.92972281457866,0,0.928735856063958,0,0.118306800039844,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.702848489956279,0,0,0,0,0,0.0868836144680828,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0.34444334449382,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0.386682873168488,0,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0.464845549297286,0,0,4.31247012246524,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0,0,0.421258456238981,0,5.60541026151954,0,0.272999822815972,0.141405431953713,1.13008116620243,0,0.66343897524122,2.19225442626881,0,0.655894752046633,0,0,0,0,0,0,0,1.05553817648832,1.31717957183961,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.71623345421307,0.296964680832639,0,0,0.140669416410513,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.384751292518985,0,0,0.538545866458633,0.869178975376065,1.5950057986596,0.0915975934018623,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.134802265961354,0.802577647298789,0.468528891450678,0,0,0,0.789168805698781,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.343972064943233,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,0,1.39866726707491,0,0,0,0,0,0.235694034616795,0.271808412147228,0.104602846312333,0.203996435272644,0,0,0.136905378891993,0,0,0,0.837847203816763,0.687481272035051,0.717873024576814,0.199679000498991,0,0.446342914883745,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0.0607495566580247,0,0.236417121897595,0,0.844802692155252,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0,0.640724475406168,0,1.24271716604159,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.332787154610557,0.310482014706917,0,0,0,0,1.6468607378872,0,0,0,0,0,0,0,0.889811221596536,0.228840068396924,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,1.71553273099941,1.30497145982606,0.453411851024545,0.231522474323834,3.42631386309055,0,0,0.438568099157414,0,0.192914038270915,2.87202149110224,0,0,1.21543982470953,0.138258436151731,0,0,0,0.982829546539238,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,1.2249819094128,0,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0.733714394086716,0,0.381382095467167,0,0,0.526472298444801,0,0,0,0,0.147856086217045,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0,1.98484471355718,0,0.127762427639595,0,0,0,0,7.36229672349902,0,0.171488009437418,0,0.0657727735628491,0,0,0.549451649953598,0.157115589916002,0.560544326627578,0,0,0.9555033757741,0.643288897589907,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0.655678681511872,0,0,0,0,0,0,0,0.281951753939561,0,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0.475940431336403,0,0.5290268405154,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0.322944549180031,0.0620747142958579,0,0.318235791390825,0,0.435433495793923,0.684466602170562,0,0.430333232356058,0.332660356546013,0,0.213454691755431,0,0.179650404213174,0,0.488965776731466,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.61560529038394,0,0,0.286235987131057,0.136874425072884,0.376627918784408,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.434539556882471,0,0.973269740605272,0.189069634328136,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,0,0,0,1.18800285728205,2.22540236350701,0,0,0,0,0,0.438977620880838,0.30648779579902,1.65261864797256,0,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.206105058476878,0,0.37223371266318,0,0,0,0.276149695926898,0.80823028409406,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,4.69348596989448,1.92972281457866,0,0.928735856063958,0,0.118306800039844,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.702848489956279,0,0,0,0,0,0.0868836144680828,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0.34444334449382,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0.386682873168488,0,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0.464845549297286,0,0,4.31247012246524,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0,0,0.421258456238981,0,5.60541026151954,0,0.272999822815972,0.141405431953713,1.13008116620243,0,0.66343897524122,2.19225442626881,0,0.655894752046633,0,0,0,0,0,0,0,1.05553817648832,1.31717957183961,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.71623345421307,0.296964680832639,0,0,0.140669416410513,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.384751292518985,0,0,0.538545866458633,0.869178975376065,1.5950057986596,0.0915975934018623,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.134802265961354,0.802577647298789,0.468528891450678,0,0,0,0.789168805698781,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.343972064943233,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,0,1.39866726707491,0,0,0,0,0,0.235694034616795,0.271808412147228,0.104602846312333,0.203996435272644,0,0,0.136905378891993,0,0,0,0.837847203816763,0.687481272035051,0.717873024576814,0.199679000498991,0,0.446342914883745,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0.0607495566580247,0,0.236417121897595,0,0.844802692155252,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0,0.640724475406168,0,1.24271716604159,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.332787154610557,0.310482014706917,0,0,0,0,1.6468607378872,0,0,0,0,0,0,0,0.889811221596536,0.228840068396924,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,1.71553273099941,1.30497145982606,0.453411851024545,0.231522474323834,3.42631386309055,0,0,0.438568099157414,0,0.192914038270915,2.87202149110224,0,0,1.21543982470953,0.138258436151731,0,0,0,0.982829546539238,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,1.2249819094128,0,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0.733714394086716,0,0.381382095467167,0,0,0.526472298444801,0,0,0,0,0.147856086217045,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0,1.98484471355718,0,0.127762427639595,0,0,0,0,7.36229672349902,0,0.171488009437418,0,0.0657727735628491,0,0,0.549451649953598,0.157115589916002,0.560544326627578,0,0,0.9555033757741,0.643288897589907,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0.655678681511872,0,0,0,0,0,0,0,0.281951753939561,0,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0.475940431336403,0,0.5290268405154,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0.322944549180031,0.0620747142958579,0,0.318235791390825,0,0.435433495793923,0.684466602170562,0,0.430333232356058,0.332660356546013,0,0.213454691755431,0,0.179650404213174,0,0.488965776731466,0,0,0.201273793591026,0 | ||
|short_description=p@chr11:60719765..60719782,- | |||
}} | }} |
Latest revision as of 23:20, 23 July 2015
Short description: | p@chr11:60719765..60719782, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60719765..60719782, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.62e-10 | 3 |
stem cell of epidermis | 1.62e-10 | 3 |
chorionic membrane mesenchymal stem cell | 1.87e-10 | 3 |
synovial cell | 7.46e-10 | 3 |
mesothelial cell | 5.19e-09 | 19 |
meningothelial cell | 2.69e-08 | 1 |
smooth muscle cell of the pulmonary artery | 5.82e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.62e-10 | 3 |
papillary layer of dermis | 1.62e-10 | 3 |
egg chorion | 1.87e-10 | 3 |
stratified squamous epithelium | 7.46e-10 | 3 |
layer of synovial tissue | 7.46e-10 | 3 |
synovial joint | 7.46e-10 | 3 |
synovial membrane of synovial joint | 7.46e-10 | 3 |
chorion | 8.01e-10 | 7 |
organ component layer | 7.61e-09 | 66 |
penis | 2.02e-08 | 1 |
intromittent organ | 2.02e-08 | 1 |
lateral plate mesenchyme | 2.02e-08 | 1 |
undifferentiated genital tubercle | 2.02e-08 | 1 |
somatopleure | 2.02e-08 | 1 |
lower lobe of right lung | 4.41e-08 | 1 |
right lung lobe | 4.41e-08 | 1 |
lower lobe of lung | 4.41e-08 | 1 |
lobe of lung | 4.41e-08 | 1 |
right lung | 4.41e-08 | 1 |
vermiform appendix | 6.24e-08 | 1 |
caecum | 6.24e-08 | 1 |
midgut | 6.24e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.69e-08 | 1 |
meningioma | 2.69e-08 | 1 |