FFCP PHASE1:Hg19::chr11:69867053..69867065,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=99bp_to_ENST00000528507_5end | |association_with_transcript=99bp_to_ENST00000528507_5end | ||
|cluster_id=chr11:69867053..69867065,- | |||
|description=CAGE_peak_2_at_ENST00000528507_5end | |description=CAGE_peak_2_at_ENST00000528507_5end | ||
|id=chr11:69867053..69867065,- | |id=chr11:69867053..69867065,- | ||
|ontology_enrichment_celltype=CL:0002334!3.36e-16!12;CL:0002583!3.13e-12!2;CL:0002621!1.54e-08!3;CL:0002582!3.13e-08!3;CL:1001319!2.22e-07!1;CL:1000600!2.22e-07!1;CL:0002570!4.09e-07!8 | |ontology_enrichment_celltype=CL:0002334!3.36e-16!12;CL:0002583!3.13e-12!2;CL:0002621!1.54e-08!3;CL:0002582!3.13e-08!3;CL:1001319!2.22e-07!1;CL:1000600!2.22e-07!1;CL:0002570!4.09e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:1001319;3.34e-66;1!CL:1000600;3.34e-66;1!CL:0002535;3.61e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.39e-66,1;CL:1000600,2.39e-66,1;CL:0002535,3.61e-34,2 | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.07e-08;65!UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10 | |||
|ontology_enrichment_disease=DOID:3111!2.36e-07!1;DOID:3603!2.36e-07!1;DOID:3369!4.01e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3111;3.34e-66;1!DOID:3603;3.34e-66;1!DOID:4362;1.40e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,4.66e-66,1;DOID:3603,4.66e-66,1;DOID:4362,1.40e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.54e-08!3;UBERON:0004645!2.22e-07!1;UBERON:0001256!2.22e-07!1;UBERON:0001259!2.22e-07!1;UBERON:0004913!2.66e-07!1;UBERON:0003703!2.66e-07!1;UBERON:0001174!2.66e-07!1;UBERON:0004914!2.66e-07!1;UBERON:0001013!8.83e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;3.34e-66;1!UBERON:0001256;3.34e-66;1!UBERON:0001259;3.34e-66;1!UBERON:0006955;3.61e-34;2!UBERON:0004801;3.61e-34;2!UBERON:0001255;5.96e-34;2!UBERON:0001556;5.96e-34;2!UBERON:0000365;1.71e-14;5!UBERON:0000344;2.76e-14;20!UBERON:0000002;2.19e-12;6!UBERON:0001560;2.19e-12;6!UBERON:0005910;2.59e-12;6!UBERON:0003350;1.41e-09;8!UBERON:0003134;1.23e-08;33!UBERON:0003133;1.23e-08;44!UBERON:0000474;2.46e-07;37!UBERON:0000486;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.39e-66,1;UBERON:0001256,2.39e-66,1;UBERON:0001259,2.39e-66,1;UBERON:0006955,3.61e-34,2;UBERON:0004801,3.61e-34,2;UBERON:0001255,5.04e-34,2;UBERON:0001556,5.04e-34,2;UBERON:0000365,1.60e-14,5;UBERON:0000344,2.76e-14,20;UBERON:0000002,2.19e-12,6;UBERON:0001560,2.19e-12,6;UBERON:0005910,2.45e-12,6;UBERON:0003350,1.35e-09,8;UBERON:0003134,2.92e-08,37;UBERON:0000474,2.92e-08,37;UBERON:0003100,1.47e-07,41;UBERON:0002323,7.74e-07,46 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0.321707842287215,0,0.154209693802656,0.710246901252508,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,4.17884191585932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.934853239388898,0.554805861502613,0,0.251567901752575,0,0,0,0.310874401165561,0.147855149989634,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.286888821570705,0,1.87227517805241,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0.321707842287215,0,0.154209693802656,0.710246901252508,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,4.17884191585932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.934853239388898,0.554805861502613,0,0.251567901752575,0,0,0,0.310874401165561,0.147855149989634,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.286888821570705,0,1.87227517805241,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ENST00000528507 | |short_description=p2@ENST00000528507 | ||
}} | }} |
Latest revision as of 02:00, 24 July 2015
Short description: | p2@ENST00000528507 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000528507_5end |
Coexpression cluster: | NA |
Association with transcript: | 99bp_to_ENST00000528507_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.39e-66 | 1 |
lower urinary tract cell | 2.39e-66 | 1 |
epithelial cell of cervix | 3.61e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.39e-66 | 1 |
wall of urinary bladder | 2.39e-66 | 1 |
mucosa of urinary bladder | 2.39e-66 | 1 |
uterine epithelium | 3.61e-34 | 2 |
cervix epithelium | 3.61e-34 | 2 |
urinary bladder | 5.04e-34 | 2 |
lower urinary tract | 5.04e-34 | 2 |
urothelium | 1.60e-14 | 5 |
mucosa | 2.76e-14 | 20 |
uterine cervix | 2.19e-12 | 6 |
neck of organ | 2.19e-12 | 6 |
transitional epithelium | 2.45e-12 | 6 |
epithelium of mucosa | 1.35e-09 | 8 |
female reproductive organ | 2.92e-08 | 37 |
female reproductive system | 2.92e-08 | 37 |
female organism | 1.47e-07 | 41 |
body cavity | 7.74e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 4.66e-66 | 1 |
mucinous cystadenocarcinoma | 4.66e-66 | 1 |
cervical cancer | 1.40e-14 | 5 |