FFCP PHASE1:Hg19::chr11:8274138..8274153,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:8274138..8274153,+ | |||
|description=CAGE_peak_at_chr11:8274138..8274153,+ | |description=CAGE_peak_at_chr11:8274138..8274153,+ | ||
|id=chr11:8274138..8274153,+ | |id=chr11:8274138..8274153,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.17e-09!254;CL:1000415!2.01e-08!2;CL:0002057!3.52e-08!42;CL:0000860!1.67e-07!45;CL:0002076!2.65e-07!43 | |ontology_enrichment_celltype=CL:0000066!4.17e-09!254;CL:1000415!2.01e-08!2;CL:0002057!3.52e-08!42;CL:0000860!1.67e-07!45;CL:0002076!2.65e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.43e-24;33!CL:0002057;7.43e-24;33!CL:0000473;2.35e-15;39!CL:0000234;2.35e-15;39!CL:0000766;2.97e-11;69!CL:0000576;1.12e-10;48!CL:0000054;1.71e-09;2!CL:0000137;1.71e-09;2!CL:0000092;1.71e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.39e-19,42;CL:0002057,6.39e-19,42;CL:0002194,4.36e-17,59;CL:0000576,4.36e-17,59;CL:0000040,4.36e-17,59;CL:0000559,4.36e-17,59;CL:0002009,1.61e-16,61;CL:0000473,1.62e-16,48;CL:0000234,1.62e-16,48;CL:0000839,3.00e-15,66;CL:0000557,5.12e-15,67;CL:0000766,5.94e-14,72;CL:0000054,1.44e-09,2;CL:0000137,1.44e-09,2;CL:0000092,1.44e-09,2;CL:0000763,3.76e-09,108;CL:0000049,3.76e-09,108;CL:0002087,1.46e-08,115;CL:0002031,3.52e-08,120;CL:0000738,3.79e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;8.14e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.22e-17;1!DOID:3165;1.22e-17;1!DOID:0060121;1.22e-17;1!DOID:2438;1.22e-17;1!DOID:4418;1.22e-17;1!DOID:200;1.71e-09;2!DOID:4305;1.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,8.72e-18,1;DOID:3165,8.72e-18,1;DOID:0060121,8.72e-18,1;DOID:2438,8.72e-18,1;DOID:4418,8.72e-18,1;DOID:200,1.44e-09,2;DOID:4305,1.44e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002294!5.80e-09!7;UBERON:0001173!5.80e-09!7;UBERON:0004912!5.80e-09!7;UBERON:0002046!7.07e-08!5;UBERON:0004117!7.07e-08!5;UBERON:0007689!7.07e-08!5;UBERON:0007123!7.07e-08!5;UBERON:0003091!7.07e-08!5 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.36e-13,76;UBERON:0001474,3.32e-12,82;UBERON:0004765,4.41e-11,90;UBERON:0002405,1.04e-10,93;UBERON:0002390,3.88e-10,98;UBERON:0003061,3.88e-10,98;UBERON:0001434,6.33e-10,100;UBERON:0002193,3.76e-09,108 | |||
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| ||
|short_description=p@chr11:8274138..8274153,+ | |short_description=p@chr11:8274138..8274153,+ | ||
}} | }} |
Latest revision as of 03:01, 24 July 2015
Short description: | p@chr11:8274138..8274153, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:8274138..8274153, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.39e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.39e-19 | 42 |
monopoietic cell | 4.36e-17 | 59 |
monocyte | 4.36e-17 | 59 |
monoblast | 4.36e-17 | 59 |
promonocyte | 4.36e-17 | 59 |
macrophage dendritic cell progenitor | 1.61e-16 | 61 |
defensive cell | 1.62e-16 | 48 |
phagocyte | 1.62e-16 | 48 |
myeloid lineage restricted progenitor cell | 3.00e-15 | 66 |
granulocyte monocyte progenitor cell | 5.12e-15 | 67 |
myeloid leukocyte | 5.94e-14 | 72 |
bone matrix secreting cell | 1.44e-09 | 2 |
osteocyte | 1.44e-09 | 2 |
osteoclast | 1.44e-09 | 2 |
myeloid cell | 3.76e-09 | 108 |
common myeloid progenitor | 3.76e-09 | 108 |
nongranular leukocyte | 1.46e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 3.52e-08 | 120 |
leukocyte | 3.79e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.36e-13 | 76 |
bone element | 3.32e-12 | 82 |
skeletal element | 4.41e-11 | 90 |
immune system | 1.04e-10 | 93 |
hematopoietic system | 3.88e-10 | 98 |
blood island | 3.88e-10 | 98 |
skeletal system | 6.33e-10 | 100 |
hemolymphoid system | 3.76e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 8.72e-18 | 1 |
skin benign neoplasm | 8.72e-18 | 1 |
integumentary system benign neoplasm | 8.72e-18 | 1 |
dermis tumor | 8.72e-18 | 1 |
cutaneous fibrous histiocytoma | 8.72e-18 | 1 |
giant cell tumor | 1.44e-09 | 2 |
bone giant cell tumor | 1.44e-09 | 2 |