FFCP PHASE1:Hg19::chr12:109029618..109029632,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000547282_5end | |association_with_transcript=0bp_to_ENST00000547282_5end | ||
|cluster_id=chr12:109029618..109029632,+ | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_1_at_ENST00000547282_5end | |description=CAGE_peak_1_at_ENST00000547282_5end | ||
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|ontology_enrichment_celltype=CL:0000542!3.27e-37!53;CL:0000051!3.27e-37!53;CL:0000838!7.11e-36!52;CL:0000945!2.33e-34!24;CL:0000826!2.33e-34!24;CL:0000738!3.02e-26!140;CL:0000037!2.56e-23!172;CL:0000566!2.56e-23!172;CL:0002087!4.57e-22!119;CL:0000236!1.27e-21!14;CL:0000988!8.11e-21!182;CL:0002032!3.12e-19!165;CL:0000837!3.12e-19!165;CL:0002031!2.53e-16!124;CL:0000084!3.07e-07!25;CL:0000827!3.07e-07!25 | |ontology_enrichment_celltype=CL:0000542!3.27e-37!53;CL:0000051!3.27e-37!53;CL:0000838!7.11e-36!52;CL:0000945!2.33e-34!24;CL:0000826!2.33e-34!24;CL:0000738!3.02e-26!140;CL:0000037!2.56e-23!172;CL:0000566!2.56e-23!172;CL:0002087!4.57e-22!119;CL:0000236!1.27e-21!14;CL:0000988!8.11e-21!182;CL:0002032!3.12e-19!165;CL:0000837!3.12e-19!165;CL:0002031!2.53e-16!124;CL:0000084!3.07e-07!25;CL:0000827!3.07e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.37e-69;24!CL:0000236;1.20e-46;13!CL:0000542;7.32e-22;53!CL:0000784;8.42e-12;3!CL:0000226;3.47e-10;3!CL:0000842;3.47e-10;3 | |ontology_enrichment_celltype_v019=CL:0000945;4.37e-69;24!CL:0000236;1.20e-46;13!CL:0000542;7.32e-22;53!CL:0000784;8.42e-12;3!CL:0000226;3.47e-10;3!CL:0000842;3.47e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.39e-69,24;CL:0000826,4.39e-69,24;CL:0000236,8.60e-50,14;CL:0000542,1.29e-33,53;CL:0000051,1.29e-33,53;CL:0000838,2.69e-31,52;CL:0000738,1.45e-21,136;CL:0002087,3.51e-17,115;CL:0000037,7.17e-16,168;CL:0000988,1.21e-14,177;CL:0000784,8.43e-12,3;CL:0000817,2.62e-11,3;CL:0002032,2.87e-11,161;CL:0000837,2.87e-11,161;CL:0002031,3.27e-11,120;CL:0000226,2.50e-10,3;CL:0000842,2.50e-10,3;CL:0000785,3.41e-08,2;CL:0000955,3.41e-08,2;CL:0000818,3.41e-08,2;CL:0000954,3.41e-08,2;CL:0000816,3.41e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;7.32e-22;53!UBERON:0004872;4.32e-12;7!CL:0000954;3.60e-08;2!UBERON:0006965;1.62e-07;2 | |ontology_enrichment_development_v019=CL:0000051;7.32e-22;53!UBERON:0004872;4.32e-12;7!CL:0000954;3.60e-08;2!UBERON:0006965;1.62e-07;2 | ||
|ontology_enrichment_disease=DOID:2531!3.52e-08!51;DOID:0060083!3.52e-08!51;DOID:0060058!3.78e-08!10 | |ontology_enrichment_disease=DOID:2531!3.52e-08!51;DOID:0060083!3.52e-08!51;DOID:0060058!3.78e-08!10 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.52e-19!115;UBERON:0000178!3.44e-10!15;UBERON:0000179!3.44e-10!15;UBERON:0000463!3.44e-10!15;UBERON:0004177!5.53e-09!7 | |ontology_enrichment_uberon=UBERON:0007023!2.52e-19!115;UBERON:0000178!3.44e-10!15;UBERON:0000179!3.44e-10!15;UBERON:0000463!3.44e-10!15;UBERON:0004177!5.53e-09!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.97e-20;15!UBERON:0000179;2.97e-20;15!UBERON:0000463;2.97e-20;15!UBERON:0002390;6.11e-17;32!UBERON:0002193;1.35e-12;42!UBERON:0002106;3.12e-11;3!UBERON:0004177;6.79e-07;5!UBERON:0005057;6.79e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.97e-20;15!UBERON:0000179;2.97e-20;15!UBERON:0000463;2.97e-20;15!UBERON:0002390;6.11e-17;32!UBERON:0002193;1.35e-12;42!UBERON:0002106;3.12e-11;3!UBERON:0004177;6.79e-07;5!UBERON:0005057;6.79e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.73e-20,15;UBERON:0000179,2.73e-20,15;UBERON:0000463,2.73e-20,15;UBERON:0002106,3.12e-11,3;UBERON:0004854,3.12e-11,3;UBERON:0009034,3.12e-11,3;UBERON:0002095,3.12e-11,3;UBERON:0004782,3.12e-11,3;UBERON:0003281,3.12e-11,3;UBERON:0009664,3.12e-11,3;UBERON:0002296,3.12e-11,3;UBERON:0005602,3.12e-11,3;UBERON:0001179,3.12e-11,3;UBERON:0006293,3.12e-11,3;UBERON:0007023,9.75e-08,114 | |||
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|short_description=p1@ENST00000547282 | |short_description=p1@ENST00000547282 | ||
}} | }} |
Latest revision as of 04:39, 24 July 2015
Short description: | p1@ENST00000547282 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000547282_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000547282_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.39e-69 | 24 |
pro-B cell | 4.39e-69 | 24 |
B cell | 8.60e-50 | 14 |
lymphocyte | 1.29e-33 | 53 |
common lymphoid progenitor | 1.29e-33 | 53 |
lymphoid lineage restricted progenitor cell | 2.69e-31 | 52 |
leukocyte | 1.45e-21 | 136 |
nongranular leukocyte | 3.51e-17 | 115 |
hematopoietic stem cell | 7.17e-16 | 168 |
hematopoietic cell | 1.21e-14 | 177 |
plasmacytoid dendritic cell | 8.43e-12 | 3 |
precursor B cell | 2.62e-11 | 3 |
hematopoietic oligopotent progenitor cell | 2.87e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.87e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 3.27e-11 | 120 |
single nucleate cell | 2.50e-10 | 3 |
mononuclear cell | 2.50e-10 | 3 |
mature B cell | 3.41e-08 | 2 |
pre-B-II cell | 3.41e-08 | 2 |
transitional stage B cell | 3.41e-08 | 2 |
small pre-B-II cell | 3.41e-08 | 2 |
immature B cell | 3.41e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.73e-20 | 15 |
haemolymphatic fluid | 2.73e-20 | 15 |
organism substance | 2.73e-20 | 15 |
spleen | 3.12e-11 | 3 |
gastrointestinal system mesentery | 3.12e-11 | 3 |
stomach region | 3.12e-11 | 3 |
mesentery | 3.12e-11 | 3 |
gastrointestinal system serosa | 3.12e-11 | 3 |
mesentery of stomach | 3.12e-11 | 3 |
gut mesentery | 3.12e-11 | 3 |
dorsal mesentery | 3.12e-11 | 3 |
dorsal mesogastrium | 3.12e-11 | 3 |
peritoneal cavity | 3.12e-11 | 3 |
spleen primordium | 3.12e-11 | 3 |
adult organism | 9.75e-08 | 114 |