FFCP PHASE1:Hg19::chr12:109040931..109040948,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:109040931..109040948,- | |||
|description=CAGE_peak_at_chr12:109040931..109040948,- | |description=CAGE_peak_at_chr12:109040931..109040948,- | ||
|id=chr12:109040931..109040948,- | |id=chr12:109040931..109040948,- | ||
|ontology_enrichment_celltype=CL:0000723!6.51e-09!436;CL:0002371!6.69e-09!591;CL:0000048!1.09e-08!430;CL:0000012!1.64e-08!682;CL:0000548!1.79e-08!679;CL:0000004!1.79e-08!679;CL:0000255!1.79e-08!679;CL:0000034!2.20e-08!444;CL:0002194!3.90e-08!63;CL:0000576!3.90e-08!63;CL:0000040!3.90e-08!63;CL:0000559!3.90e-08!63;CL:0002009!4.00e-08!65;CL:0000839!1.08e-07!70;CL:0000144!1.15e-07!625;CL:0000557!2.42e-07!71 | |ontology_enrichment_celltype=CL:0000723!6.51e-09!436;CL:0002371!6.69e-09!591;CL:0000048!1.09e-08!430;CL:0000012!1.64e-08!682;CL:0000548!1.79e-08!679;CL:0000004!1.79e-08!679;CL:0000255!1.79e-08!679;CL:0000034!2.20e-08!444;CL:0002194!3.90e-08!63;CL:0000576!3.90e-08!63;CL:0000040!3.90e-08!63;CL:0000559!3.90e-08!63;CL:0002009!4.00e-08!65;CL:0000839!1.08e-07!70;CL:0000144!1.15e-07!625;CL:0000557!2.42e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002581;2.54e-09;1 | |ontology_enrichment_celltype_v019=CL:0002581;2.54e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002581,1.56e-09,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;7.08e-12;3!DOID:127;7.08e-12;3!DOID:4960;2.54e-09;1!DOID:0070004;2.54e-09;1!DOID:0060072;3.98e-09;4 | |ontology_enrichment_disease_v019=DOID:0060084;7.08e-12;3!DOID:127;7.08e-12;3!DOID:4960;2.54e-09;1!DOID:0070004;2.54e-09;1!DOID:0060072;3.98e-09;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.35e-12,3;DOID:127,4.35e-12,3;DOID:0060072,2.77e-09,4;DOID:4960,4.87e-09,1;DOID:0070004,4.87e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002204!6.74e-10!167;UBERON:0004765!3.19e-09!101;UBERON:0001434!3.19e-09!101;UBERON:0002371!8.23e-08!80;UBERON:0001474!2.00e-07!86 | |ontology_enrichment_uberon=UBERON:0002204!6.74e-10!167;UBERON:0004765!3.19e-09!101;UBERON:0001434!3.19e-09!101;UBERON:0002371!8.23e-08!80;UBERON:0001474!2.00e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.54e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0007195;2.54e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.16e-09,1 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.140954404095971,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0.6024118375565,0,0,0,0,1.10799081706375,0,0.217010870715852,0.447830948479849,0.32389366601898,0.257575567634187,0.290796477559129,0.377875943688809,0.727752183563449,0.464858073811369,0.411167888021826,0.309706370895104,1.1507695692886,0,0,0.344745680736619,1.93645405075148,0,0.564727018627814,0.272906150057846,0.674170453335254,0.918251677112708,0.641858054152187,0,0.659702600373432,0,0.426224750532694,0.580418477257168,0,0,0.502497330513487,1.0429658368404,0.434377689410233,0,0,0,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,0.50133791063589,0.144846518960824,0,0.486634870302636,0.189069634328136,0.443458794925128,0,0,0,0,0.324547393654683,0.348259474598534,0.797747763113191,0.715471872916026,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0.626984899610432,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.132409180813219,0,1.06400514659507,0,1.06748995729705,0.24666754841716,0,0.404132016209064,0,0.151357427644931,0,0,0.312160076830321,0,0.448346041655403,0,0,0.140450806702248,1.02077085627447,0.368502951935304,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0.919463387397059,0.45071417671979,0.907457465280168,0.179389635688862,0.427114777637135,0,0,0.206105058476878,0.257640540045629,0.930584281657949,0.337552664482532,0.194874010322397,0.504867548488229,0.0920498986422993,0,0,0.604512589365842,0.339121184620975,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0.721879481669586,0,0.168584690078102,0,0.110293972732394,0.435758888184812,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0,0.577465791044295,0,0.380508304469197,0,0.858486162094873,0.246217006087397,0.702012795417713,0.594524649154913,0.93733833986777,0.16798212819886,0,0.268675568108545,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0.901029173531752,0,0,0,0.1466765716419,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,2.10833939483032,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0.224170287987055,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,2.99161459204025,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0.535286966391485,0.473107245101804,0.117141414992713,0,0,0,0.664225598535437,0.737476674166813,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.482561763430822,1.48418066444991,0.462629081407967,0,0.0821271560138091,0,0.464841513839837,0,0,0.184161977871793,0.574072240823034,0.546273504020151,0.262248829918848,0,0.308061348417659,0,0,0,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0,0.522870902049801,0.769350375349168,0,0.650756789328606,0,0.27470839445503,0,0,0,0,0.386682873168488,0.154048617114644,0,0.827019434907183,0.214840489736547,0.435050081742686,0.170453254832202,0.178064071293475,0.330569830721956,0.192190067365106,0,0.30347334256665,0.464845549297286,0.31481234683064,0,0,0,0,0.37064843820784,0.286249773483982,0.372158369359667,0.316379424718726,0,0,0,0,0.78494864019923,0.359744915166629,0.274537029736055,0.471249609382746,0.202182481573316,3.17020642346017,0.421258456238981,0,0,0,0.272999822815972,0.141405431953713,0,0,1.32687795048244,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0.354761064070598,0.211107635297664,0.658589785919804,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0.159426272728822,0,0,0.211673582723883,0,0,0.912938716132769,0,0,0.169291777801603,0,0.403599414382095,0,0,0,0.223676107892416,0,0,0.556812347790485,0,0.540911356951966,0.33307196799782,0,0.18714054040822,0.146508179271894,0.242721043499027,0,0,0.47748896947538,0,0.307160702099232,0,0.422008249231538,0.111308705022906,0,0,0,0,0,0.306806047506464,0.123084805461069,0.311039587661807,0.0898683511473268,0,0.511572370226872,0.197286811273867,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0.13942374427860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| ||
|short_description=p@chr12:109040931..109040948,- | |short_description=p@chr12:109040931..109040948,- | ||
}} | }} |
Latest revision as of 04:39, 24 July 2015
Short description: | p@chr12:109040931..109040948, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109040931..109040948, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 1.56e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.16e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.35e-12 | 3 |
leiomyoma | 4.35e-12 | 3 |
benign neoplasm | 2.77e-09 | 4 |
bone marrow cancer | 4.87e-09 | 1 |
myeloma | 4.87e-09 | 1 |