FFCP PHASE1:Hg19::chr12:111099231..111099276,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:111099231..111099276,- | |||
|coexpression_cluster_id=C74 | |coexpression_cluster_id=C74 | ||
|description=CAGE_peak_at_chr12:111099231..111099276,- | |description=CAGE_peak_at_chr12:111099231..111099276,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000037!1.03e-34!172;CL:0000566!1.03e-34!172;CL:0002032!8.26e-32!165;CL:0000837!8.26e-32!165;CL:0000988!3.93e-31!182;CL:0000738!1.36e-29!140;CL:0002087!7.75e-27!119;CL:0002031!1.46e-25!124;CL:0000945!4.89e-22!24;CL:0000826!4.89e-22!24;CL:0000763!2.54e-19!112;CL:0000049!2.54e-19!112;CL:0000557!2.58e-16!71;CL:0000236!7.30e-15!14;CL:0002009!1.19e-14!65;CL:0000766!1.47e-14!76;CL:0000839!1.59e-14!70;CL:0002194!2.04e-14!63;CL:0000576!2.04e-14!63;CL:0000040!2.04e-14!63;CL:0000559!2.04e-14!63;CL:0000542!1.16e-11!53;CL:0000051!1.16e-11!53;CL:0000838!6.95e-11!52;CL:0002057!6.08e-08!42;CL:0000860!5.28e-07!45;CL:0002393!6.62e-07!9;CL:0002397!6.62e-07!9 | |ontology_enrichment_celltype=CL:0000037!1.03e-34!172;CL:0000566!1.03e-34!172;CL:0002032!8.26e-32!165;CL:0000837!8.26e-32!165;CL:0000988!3.93e-31!182;CL:0000738!1.36e-29!140;CL:0002087!7.75e-27!119;CL:0002031!1.46e-25!124;CL:0000945!4.89e-22!24;CL:0000826!4.89e-22!24;CL:0000763!2.54e-19!112;CL:0000049!2.54e-19!112;CL:0000557!2.58e-16!71;CL:0000236!7.30e-15!14;CL:0002009!1.19e-14!65;CL:0000766!1.47e-14!76;CL:0000839!1.59e-14!70;CL:0002194!2.04e-14!63;CL:0000576!2.04e-14!63;CL:0000040!2.04e-14!63;CL:0000559!2.04e-14!63;CL:0000542!1.16e-11!53;CL:0000051!1.16e-11!53;CL:0000838!6.95e-11!52;CL:0002057!6.08e-08!42;CL:0000860!5.28e-07!45;CL:0002393!6.62e-07!9;CL:0002397!6.62e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.54e-50;24!CL:0000236;8.27e-23;13!CL:0000542;1.10e-16;53 | |ontology_enrichment_celltype_v019=CL:0000945;6.54e-50;24!CL:0000236;8.27e-23;13!CL:0000542;1.10e-16;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.11e-50,24;CL:0000826,3.11e-50,24;CL:0000236,2.17e-26,14;CL:0000542,2.95e-25,53;CL:0000051,2.95e-25,53;CL:0000838,4.05e-23,52;CL:0000037,5.76e-23,168;CL:0002032,9.90e-23,161;CL:0000837,9.90e-23,161;CL:0000988,2.31e-21,177;CL:0000738,2.72e-18,136;CL:0002087,7.14e-18,115;CL:0002031,2.26e-15,120;CL:0000785,3.43e-09,2;CL:0000955,3.43e-09,2;CL:0000818,3.43e-09,2;CL:0000954,3.43e-09,2;CL:0000816,3.43e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.10e-16;53!CL:0000954;3.29e-09;2 | |ontology_enrichment_development_v019=CL:0000051;1.10e-16;53!CL:0000954;3.29e-09;2 | ||
|ontology_enrichment_disease=DOID:2531!5.44e-08!51;DOID:0060083!5.44e-08!51 | |ontology_enrichment_disease=DOID:2531!5.44e-08!51;DOID:0060083!5.44e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:0060058;5.06e-10;10!DOID:2531;2.41e-07;51!DOID:0060083;2.41e-07;51 | |ontology_enrichment_disease_v019=DOID:0060058;5.06e-10;10!DOID:2531;2.41e-07;51!DOID:0060083;2.41e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,6.33e-12,51;DOID:0060083,6.33e-12,51;DOID:0060058,4.24e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.41e-19!102;UBERON:0003061!7.41e-19!102;UBERON:0002193!1.25e-16!112;UBERON:0002371!5.55e-14!80;UBERON:0001474!3.99e-12!86;UBERON:0002405!2.42e-10!115;UBERON:0007023!2.29e-09!115;UBERON:0004765!3.46e-09!101;UBERON:0001434!3.46e-09!101 | |ontology_enrichment_uberon=UBERON:0002390!7.41e-19!102;UBERON:0003061!7.41e-19!102;UBERON:0002193!1.25e-16!112;UBERON:0002371!5.55e-14!80;UBERON:0001474!3.99e-12!86;UBERON:0002405!2.42e-10!115;UBERON:0007023!2.29e-09!115;UBERON:0004765!3.46e-09!101;UBERON:0001434!3.46e-09!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,6.49513948857586,7.22485187159523,5.58846547327123,0,0,0,0,0,0,7.12698245338775,6.68195392690881,0.587200878669695,0,0.401088894940283,0.651032612147555,1.11957737119962,0.647787332037959,1.54545340580512,0.145398238779565,0,0.242584061187816,0,1.23350366406548,0.619412741790207,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,0.845021145247767,0.637812899895131,0.209658645508376,0.22465726229299,0.450530678524519,0.16072558669708,0.285012743741249,0.39783335439818,0.365328307529268,0,2.73069305631066,1.77901850772711,1.70692089026603,3.2031678962881,4.02326707968138,0.661044872784862,0.954053754535364,3.98449078376614,1.17447437874188,4.20500550937752,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,1.94826728407911,0,0,0,0,0.128091319725675,0,0,0,0,0,0,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.196468613246569,0,0,0,0,0.930705723632056,0.715471872916026,2.28797964312051,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.468008530278475,0.743155811443641,0,0,0,0,0,0,0,0,0.621984346622316,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,2.10833939483032,0,0,0,0,0,0,1.2329365839288,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.213455115606889,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0.411362273086194,0.648473311192717,0,3.17250070517708,0,0,0,2.78704762688578,0.865615277858669,0,0,2.59453182862662,0.191505370132367,0.846694330895531,0.649243880549111,0,8.44468312422811,0,0,0.338583555603207,2.24823305145179,1.41259795033733,0.851692475380653,0.687010689511529,0.614481528616916,1.3420566473545,0.333698283423817,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.65770349318689,0,0,6.0311554675924,0,0,0,5.62729607249559,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0,0.658156191461918,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,1.2558420511602,0,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0,0,0.337005664903385,0,0.234264445725339,3.46664099509765,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,1.27746588066972,0,0,0.558564802544508,0,0,0,2.14613024068285,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0,0,3.76503412598974,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0.414239055347196,0,0.395223263795889,1.70509637733254,0,0,0,0,0,0,0,0.244052529803926,0,0,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0,0.327130788511688,0,0,0,0,2.56060151265938,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,1.26178792002005,0,0,0.3062454773532,0.128458450192919,0,0.319267718114302,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0,5.07029545245429,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0.356760272332706,0,0,0.150962843566674,0,0,0,0,0,0.588925401344836,0,0,0,0.563903507879121,0.257831551894309,25.285112449007,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0.50141507858475,0.606229585745915,1.60778478093707,0,0,0.639701945702943,0.23806443146374,0.193766729508018,0.124149428591716,0,0,0,0,0.342233301085281,1.48174516632093,0.143444410785353,0,0,0,0,0,0,0,0,0,1.40891655513718,7.37307532297436 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,6.49513948857586,7.22485187159523,5.58846547327123,0,0,0,0,0,0,7.12698245338775,6.68195392690881,0.587200878669695,0,0.401088894940283,0.651032612147555,1.11957737119962,0.647787332037959,1.54545340580512,0.145398238779565,0,0.242584061187816,0,1.23350366406548,0.619412741790207,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,0.845021145247767,0.637812899895131,0.209658645508376,0.22465726229299,0.450530678524519,0.16072558669708,0.285012743741249,0.39783335439818,0.365328307529268,0,2.73069305631066,1.77901850772711,1.70692089026603,3.2031678962881,4.02326707968138,0.661044872784862,0.954053754535364,3.98449078376614,1.17447437874188,4.20500550937752,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,1.94826728407911,0,0,0,0,0.128091319725675,0,0,0,0,0,0,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.196468613246569,0,0,0,0,0.930705723632056,0.715471872916026,2.28797964312051,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.468008530278475,0.743155811443641,0,0,0,0,0,0,0,0,0.621984346622316,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,2.10833939483032,0,0,0,0,0,0,1.2329365839288,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.213455115606889,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0.411362273086194,0.648473311192717,0,3.17250070517708,0,0,0,2.78704762688578,0.865615277858669,0,0,2.59453182862662,0.191505370132367,0.846694330895531,0.649243880549111,0,8.44468312422811,0,0,0.338583555603207,2.24823305145179,1.41259795033733,0.851692475380653,0.687010689511529,0.614481528616916,1.3420566473545,0.333698283423817,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.65770349318689,0,0,6.0311554675924,0,0,0,5.62729607249559,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0,0.658156191461918,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,1.2558420511602,0,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0,0,0.337005664903385,0,0.234264445725339,3.46664099509765,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,1.27746588066972,0,0,0.558564802544508,0,0,0,2.14613024068285,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0,0,3.76503412598974,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0.414239055347196,0,0.395223263795889,1.70509637733254,0,0,0,0,0,0,0,0.244052529803926,0,0,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0,0.327130788511688,0,0,0,0,2.56060151265938,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,1.26178792002005,0,0,0.3062454773532,0.128458450192919,0,0.319267718114302,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0,5.07029545245429,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0.356760272332706,0,0,0.150962843566674,0,0,0,0,0,0.588925401344836,0,0,0,0.563903507879121,0.257831551894309,25.285112449007,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0.50141507858475,0.606229585745915,1.60778478093707,0,0,0.639701945702943,0.23806443146374,0.193766729508018,0.124149428591716,0,0,0,0,0.342233301085281,1.48174516632093,0.143444410785353,0,0,0,0,0,0,0,0,0,1.40891655513718,7.37307532297436 | ||
|short_description=p@chr12:111099231..111099276,- | |short_description=p@chr12:111099231..111099276,- | ||
}} | }} |
Latest revision as of 04:56, 24 July 2015
Short description: | p@chr12:111099231..111099276, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:111099231..111099276, - |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.11e-50 | 24 |
pro-B cell | 3.11e-50 | 24 |
B cell | 2.17e-26 | 14 |
lymphocyte | 2.95e-25 | 53 |
common lymphoid progenitor | 2.95e-25 | 53 |
lymphoid lineage restricted progenitor cell | 4.05e-23 | 52 |
hematopoietic stem cell | 5.76e-23 | 168 |
hematopoietic oligopotent progenitor cell | 9.90e-23 | 161 |
hematopoietic multipotent progenitor cell | 9.90e-23 | 161 |
hematopoietic cell | 2.31e-21 | 177 |
leukocyte | 2.72e-18 | 136 |
nongranular leukocyte | 7.14e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 2.26e-15 | 120 |
mature B cell | 3.43e-09 | 2 |
pre-B-II cell | 3.43e-09 | 2 |
transitional stage B cell | 3.43e-09 | 2 |
small pre-B-II cell | 3.43e-09 | 2 |
immature B cell | 3.43e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.33e-12 | 51 |
immune system cancer | 6.33e-12 | 51 |
lymphoma | 4.24e-10 | 10 |