FFCP PHASE1:Hg19::chr12:111106975..111106991,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:111106975..111106991,- | |||
|coexpression_cluster_id=C342 | |coexpression_cluster_id=C342 | ||
|description=CAGE_peak_at_chr12:111106975..111106991,- | |description=CAGE_peak_at_chr12:111106975..111106991,- | ||
|id=chr12:111106975..111106991,- | |id=chr12:111106975..111106991,- | ||
|ontology_enrichment_celltype=CL:0000945!4.49e-89!24;CL:0000826!4.49e-89!24;CL:0000236!3.98e-59!14;CL:0000542!1.51e-41!53;CL:0000051!1.51e-41!53;CL:0000838!1.81e-38!52;CL:0000738!1.04e-16!140;CL:0002087!1.69e-15!119;CL:0002032!2.40e-13!165;CL:0000837!2.40e-13!165;CL:0002031!3.67e-13!124;CL:0000037!1.40e-12!172;CL:0000566!1.40e-12!172;CL:0000988!1.38e-11!182;CL:0000785!5.53e-11!2;CL:0000955!5.53e-11!2;CL:0000818!5.53e-11!2;CL:0000954!5.53e-11!2;CL:0000816!5.53e-11!2;CL:0000817!1.35e-07!3 | |ontology_enrichment_celltype=CL:0000945!4.49e-89!24;CL:0000826!4.49e-89!24;CL:0000236!3.98e-59!14;CL:0000542!1.51e-41!53;CL:0000051!1.51e-41!53;CL:0000838!1.81e-38!52;CL:0000738!1.04e-16!140;CL:0002087!1.69e-15!119;CL:0002032!2.40e-13!165;CL:0000837!2.40e-13!165;CL:0002031!3.67e-13!124;CL:0000037!1.40e-12!172;CL:0000566!1.40e-12!172;CL:0000988!1.38e-11!182;CL:0000785!5.53e-11!2;CL:0000955!5.53e-11!2;CL:0000818!5.53e-11!2;CL:0000954!5.53e-11!2;CL:0000816!5.53e-11!2;CL:0000817!1.35e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.47e-131;24!CL:0000236;1.88e-90;13!CL:0000542;6.56e-40;53!CL:0000946;5.16e-11;1!CL:0000785;5.16e-11;1!CL:0000819;5.16e-11;1!CL:0000786;5.16e-11;1!CL:0002087;1.55e-10;104!CL:0000738;1.93e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.90e-131,24;CL:0000826,3.90e-131,24;CL:0000236,1.27e-99,14;CL:0000542,6.07e-65,53;CL:0000051,6.07e-65,53;CL:0000838,2.44e-59,52;CL:0002087,2.31e-28,115;CL:0002031,3.95e-24,120;CL:0000738,1.25e-23,136;CL:0000785,3.49e-20,2;CL:0000955,3.49e-20,2;CL:0000818,3.49e-20,2;CL:0000954,3.49e-20,2;CL:0000816,3.49e-20,2;CL:0002032,1.39e-19,161;CL:0000837,1.39e-19,161;CL:0000037,1.15e-18,168;CL:0000988,1.37e-17,177;CL:0000817,8.57e-14,3;CL:0000819,5.43e-11,1;CL:0000946,6.00e-11,1;CL:0000786,6.00e-11,1;CL:0000980,6.00e-11,1;CL:0000134,1.97e-07,354;CL:0002320,3.12e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000051;6.56e-40;53!CL:0000954;2.86e-20;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.58e-12!10 | |ontology_enrichment_disease=DOID:0060058!2.58e-12!10 | ||
|ontology_enrichment_disease_v019=DOID:630;9.57e-12;1!DOID:0050177;9.57e-12;1!DOID:0050427;9.57e-12;1!DOID:2355;3.63e-11;1!DOID:0060073;5.16e-11;1!DOID:8675;5.16e-11;1!DOID:12603;5.16e-11;1!DOID:0060058;1.51e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,9.57e-12,1;DOID:0050177,9.57e-12,1;DOID:0050427,9.57e-12,1;DOID:2355,4.01e-11,1;DOID:12603,4.44e-11,1;DOID:0060073,5.43e-11,1;DOID:8675,5.43e-11,1;DOID:0060058,1.58e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.51e-17!7;UBERON:0002106!2.31e-15!3;UBERON:0004854!2.31e-15!3;UBERON:0009034!2.31e-15!3;UBERON:0002095!2.31e-15!3;UBERON:0004782!2.31e-15!3;UBERON:0003281!2.31e-15!3;UBERON:0009664!2.31e-15!3;UBERON:0002296!2.31e-15!3;UBERON:0005602!2.31e-15!3;UBERON:0001179!2.31e-15!3;UBERON:0006293!2.31e-15!3 | |ontology_enrichment_uberon=UBERON:0004177!5.51e-17!7;UBERON:0002106!2.31e-15!3;UBERON:0004854!2.31e-15!3;UBERON:0009034!2.31e-15!3;UBERON:0002095!2.31e-15!3;UBERON:0004782!2.31e-15!3;UBERON:0003281!2.31e-15!3;UBERON:0009664!2.31e-15!3;UBERON:0002296!2.31e-15!3;UBERON:0005602!2.31e-15!3;UBERON:0001179!2.31e-15!3;UBERON:0006293!2.31e-15!3 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.85e-07,371 | |||
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|short_description=p@chr12:111106975..111106991,- | |short_description=p@chr12:111106975..111106991,- | ||
}} | }} |
Latest revision as of 04:56, 24 July 2015
Short description: | p@chr12:111106975..111106991, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:111106975..111106991, - |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.90e-131 | 24 |
pro-B cell | 3.90e-131 | 24 |
B cell | 1.27e-99 | 14 |
lymphocyte | 6.07e-65 | 53 |
common lymphoid progenitor | 6.07e-65 | 53 |
lymphoid lineage restricted progenitor cell | 2.44e-59 | 52 |
nongranular leukocyte | 2.31e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 3.95e-24 | 120 |
leukocyte | 1.25e-23 | 136 |
mature B cell | 3.49e-20 | 2 |
pre-B-II cell | 3.49e-20 | 2 |
transitional stage B cell | 3.49e-20 | 2 |
small pre-B-II cell | 3.49e-20 | 2 |
immature B cell | 3.49e-20 | 2 |
hematopoietic oligopotent progenitor cell | 1.39e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.39e-19 | 161 |
hematopoietic stem cell | 1.15e-18 | 168 |
hematopoietic cell | 1.37e-17 | 177 |
precursor B cell | 8.57e-14 | 3 |
B-1 B cell | 5.43e-11 | 1 |
antibody secreting cell | 6.00e-11 | 1 |
plasma cell | 6.00e-11 | 1 |
plasmablast | 6.00e-11 | 1 |
mesenchymal cell | 1.97e-07 | 354 |
connective tissue cell | 3.12e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.85e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 9.57e-12 | 1 |
monogenic disease | 9.57e-12 | 1 |
xeroderma pigmentosum | 9.57e-12 | 1 |
anemia | 4.01e-11 | 1 |
acute leukemia | 4.44e-11 | 1 |
lymphatic system cancer | 5.43e-11 | 1 |
lymphosarcoma | 5.43e-11 | 1 |
lymphoma | 1.58e-09 | 10 |