FFCP PHASE1:Hg19::chr12:114791999..114792001,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:114791999..114792001,- | |||
|coexpression_cluster_id=C90 | |coexpression_cluster_id=C90 | ||
|description=CAGE_peak_at_chr12:114791999..114792001,- | |description=CAGE_peak_at_chr12:114791999..114792001,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002617!3.83e-13!2;CL:0002598!1.25e-07!1;CL:0002574!4.09e-07!1;CL:0000569!5.38e-07!4;CL:0000011!5.38e-07!4 | |ontology_enrichment_celltype=CL:0002617!3.83e-13!2;CL:0002598!1.25e-07!1;CL:0002574!4.09e-07!1;CL:0000569!5.38e-07!4;CL:0000011!5.38e-07!4 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;6.30e-26;4!UBERON:0007284;6.30e-26;4 | |ontology_enrichment_development_v019=UBERON:0005062;6.30e-26;4!UBERON:0007284;6.30e-26;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.87e-11;10 | |ontology_enrichment_disease_v019=DOID:171;2.87e-11;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000948!9.91e-12!24;UBERON:0005498!9.91e-12!24;UBERON:0004140!9.91e-12!24;UBERON:0009881!9.91e-12!24;UBERON:0004141!9.91e-12!24;UBERON:0003084!9.91e-12!24;UBERON:0007005!9.91e-12!24;UBERON:0004139!9.91e-12!24;UBERON:0004291!9.91e-12!24;UBERON:0007100!2.49e-10!27;UBERON:0003978!1.82e-09!3;UBERON:0009751!1.82e-09!3;UBERON:0000946!1.82e-09!3;UBERON:0002523!1.82e-09!3;UBERON:0005983!1.82e-09!3;UBERON:0002165!1.82e-09!3;UBERON:0002062!1.82e-09!3;UBERON:0007280!1.82e-09!3;UBERON:0002135!7.03e-08!1;UBERON:0002171!7.50e-08!1;UBERON:0006518!7.50e-08!1;UBERON:0008949!7.50e-08!1;UBERON:0000101!7.50e-08!1;UBERON:0002167!7.50e-08!1;UBERON:0002084!8.00e-08!1;UBERON:0002082!8.00e-08!1;UBERON:0004706!8.00e-08!1;UBERON:0002146!1.42e-07!1;UBERON:0005623!1.42e-07!1 | |ontology_enrichment_uberon=UBERON:0000948!9.91e-12!24;UBERON:0005498!9.91e-12!24;UBERON:0004140!9.91e-12!24;UBERON:0009881!9.91e-12!24;UBERON:0004141!9.91e-12!24;UBERON:0003084!9.91e-12!24;UBERON:0007005!9.91e-12!24;UBERON:0004139!9.91e-12!24;UBERON:0004291!9.91e-12!24;UBERON:0007100!2.49e-10!27;UBERON:0003978!1.82e-09!3;UBERON:0009751!1.82e-09!3;UBERON:0000946!1.82e-09!3;UBERON:0002523!1.82e-09!3;UBERON:0005983!1.82e-09!3;UBERON:0002165!1.82e-09!3;UBERON:0002062!1.82e-09!3;UBERON:0007280!1.82e-09!3;UBERON:0002135!7.03e-08!1;UBERON:0002171!7.50e-08!1;UBERON:0006518!7.50e-08!1;UBERON:0008949!7.50e-08!1;UBERON:0000101!7.50e-08!1;UBERON:0002167!7.50e-08!1;UBERON:0002084!8.00e-08!1;UBERON:0002082!8.00e-08!1;UBERON:0004706!8.00e-08!1;UBERON:0002146!1.42e-07!1;UBERON:0005623!1.42e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002135;1.55e-98;1!UBERON:0002133;3.52e-50;2!UBERON:0003978;5.04e-34;3!UBERON:0000946;5.04e-34;3!UBERON:0002346;6.30e-26;4!UBERON:0000923;6.30e-26;4!UBERON:0010316;6.30e-26;4!UBERON:0005291;6.30e-26;4!UBERON:0002050;4.66e-21;5!UBERON:0005423;4.66e-21;5!UBERON:0010313;2.87e-11;10 | |ontology_enrichment_uberon_v019=UBERON:0002135;1.55e-98;1!UBERON:0002133;3.52e-50;2!UBERON:0003978;5.04e-34;3!UBERON:0000946;5.04e-34;3!UBERON:0002346;6.30e-26;4!UBERON:0000923;6.30e-26;4!UBERON:0010316;6.30e-26;4!UBERON:0005291;6.30e-26;4!UBERON:0002050;4.66e-21;5!UBERON:0005423;4.66e-21;5!UBERON:0010313;2.87e-11;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,2.55e-98,1;UBERON:0002133,4.52e-50,2;UBERON:0003978,5.96e-34,3;UBERON:0009751,5.96e-34,3;UBERON:0000946,5.96e-34,3;UBERON:0002523,5.96e-34,3;UBERON:0005983,5.96e-34,3;UBERON:0002165,5.96e-34,3;UBERON:0002062,5.96e-34,3;UBERON:0007280,5.96e-34,3;UBERON:0004797,1.91e-15,7;UBERON:0010313,3.02e-11,10;UBERON:0002342,3.02e-11,10;UBERON:0005062,3.02e-11,10 | |||
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|short_description=p@chr12:114791999..114792001,- | |short_description=p@chr12:114791999..114792001,- | ||
}} | }} |
Latest revision as of 05:18, 24 July 2015
Short description: | p@chr12:114791999..114792001, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:114791999..114792001, - |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mitral valve | 2.55e-98 | 1 |
atrioventricular valve | 4.52e-50 | 2 |
valve | 5.96e-34 | 3 |
cardiac mesenchyme | 5.96e-34 | 3 |
cardial valve | 5.96e-34 | 3 |
tunica intima | 5.96e-34 | 3 |
heart layer | 5.96e-34 | 3 |
endocardium | 5.96e-34 | 3 |
endocardial cushion | 5.96e-34 | 3 |
presumptive endocardium | 5.96e-34 | 3 |
blood vessel layer | 1.91e-15 | 7 |
neural crest-derived structure | 3.02e-11 | 10 |
neural crest | 3.02e-11 | 10 |
neural fold | 3.02e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.73e-11 | 10 |