FFCP PHASE1:Hg19::chr12:117256273..117256285,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:117256273..117256285,+ | |||
|coexpression_cluster_id=C138 | |coexpression_cluster_id=C138 | ||
|description=CAGE_peak_at_chr12:117256273..117256285,+ | |description=CAGE_peak_at_chr12:117256273..117256285,+ | ||
|id=chr12:117256273..117256285,+ | |id=chr12:117256273..117256285,+ | ||
|ontology_enrichment_celltype=CL:0000148;2.54e-21;10!CL:0002567;1.62e-18;3!CL:0000147;2.48e-15;14!CL:0000785;4.72e-15;1!CL:0000819;4.72e-15;1!CL:0000817;1.61e-14;1!CL:0002566;1.61e-14;1!CL:0000710;8.08e-11;20!CL:0000075;4.49e-08;27 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000148;2.54e-21;10!CL:0002567;1.62e-18;3!CL:0000147;2.48e-15;14!CL:0000785;4.72e-15;1!CL:0000819;4.72e-15;1!CL:0000817;1.61e-14;1!CL:0002566;1.61e-14;1!CL:0000710;8.08e-11;20!CL:0000075;4.49e-08;27 | ||
|ontology_enrichment_disease=DOID:0060073;4.72e-15;1!DOID:8675;4.72e-15;1 | |ontology_enrichment_celltype_v019_2=CL:0000148,2.06e-21,10;CL:0000541,2.06e-21,10;CL:0000817,1.14e-18,3;CL:0002567,1.24e-18,3;CL:0000147,2.14e-15,14;CL:0000819,4.73e-15,1;CL:0002566,1.23e-14,1;CL:0000710,7.29e-11,20;CL:0000785,3.56e-08,2;CL:0000955,3.56e-08,2;CL:0000818,3.56e-08,2;CL:0000954,3.56e-08,2;CL:0000816,3.56e-08,2;CL:0000075,4.16e-08,27 | ||
| | |ontology_enrichment_development_v019=UBERON:0008801;5.42e-15;1!CL:0000954;3.56e-08;2 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;4.72e-15;1!DOID:8675;4.72e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.73e-15,1;DOID:8675,4.73e-15,1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.30e-27;2!UBERON:0005058;1.30e-27;2!UBERON:0009113;1.30e-27;2!UBERON:0001831;5.42e-15;1!UBERON:0001567;5.42e-15;1!UBERON:0004177;1.18e-11;5!UBERON:0005057;1.18e-11;5!UBERON:0001044;5.08e-10;6!UBERON:0003293;5.08e-10;6!UBERON:0003294;5.08e-10;6!UBERON:0010047;5.08e-10;6!UBERON:0003408;5.08e-10;6!UBERON:0000167;5.08e-10;6!UBERON:0001829;3.81e-08;2!UBERON:0004089;3.81e-08;2!UBERON:0000007;6.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,7.91e-22,10;UBERON:0001831,5.42e-15,1;UBERON:0001567,5.42e-15,1;UBERON:0008801,5.42e-15,1;UBERON:0002370,2.41e-14,4;UBERON:0005058,2.41e-14,4;UBERON:0009113,2.41e-14,4;UBERON:0003295,2.41e-14,4;UBERON:0005562,2.41e-14,4;UBERON:0001044,4.97e-10,6;UBERON:0003293,4.97e-10,6;UBERON:0003294,4.97e-10,6;UBERON:0010047,4.97e-10,6;UBERON:0000167,4.97e-10,6;UBERON:0003351,7.10e-10,6;UBERON:0004177,1.37e-08,7;UBERON:0005057,1.37e-08,7;UBERON:0001829,3.82e-08,2;UBERON:0004089,3.82e-08,2;UBERON:0000007,5.02e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309868802321207,0.284338464974843,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0.805658634218294,0,0.488124115096339,0.367663080345869,0,0.357198913136319,0,0.450445921933289,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.621984346622316,0.144119953416961,0,1.46045156871989,1.90994212779139,1.17217447210047,0,0.308482478109971,1.20137223137567,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.510281115829547,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,1.00988449083511,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0,0,0.269604531922708,0,0,13.5016544019593,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0.157611414598396,0.157363764404994,0,1.79287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.434674820589684,0,0,0,0.285465333544967,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.472763092328763,0,0.206686796501184,0.19024743058172,0,8.22386650285773,0.496211178389294,0,0,0,0,1.82089681270989,0.227662191351298,0,0,0,0.40781839786099,0.263091094251396,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,2.58136415292167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603851374266694,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0.469919589899268,0.386747327841463,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,2.45437857376823,1.36564371450887,0,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0.402547587182052,0 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| ||
|short_description=p@chr12:117256273..117256285,+ | |short_description=p@chr12:117256273..117256285,+ | ||
}} | }} |
Latest revision as of 05:26, 24 July 2015
Short description: | p@chr12:117256273..117256285, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:117256273..117256285, + |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.06e-21 | 10 |
melanoblast | 2.06e-21 | 10 |
precursor B cell | 1.14e-18 | 3 |
light melanocyte | 1.24e-18 | 3 |
pigment cell | 2.14e-15 | 14 |
B-1 B cell | 4.73e-15 | 1 |
dark melanocyte | 1.23e-14 | 1 |
neurecto-epithelial cell | 7.29e-11 | 20 |
mature B cell | 3.56e-08 | 2 |
pre-B-II cell | 3.56e-08 | 2 |
transitional stage B cell | 3.56e-08 | 2 |
small pre-B-II cell | 3.56e-08 | 2 |
immature B cell | 3.56e-08 | 2 |
columnar/cuboidal epithelial cell | 4.16e-08 | 27 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 7.91e-22 | 10 |
parotid gland | 5.42e-15 | 1 |
cheek | 5.42e-15 | 1 |
parotid gland primordium | 5.42e-15 | 1 |
thymus | 2.41e-14 | 4 |
hemolymphoid system gland | 2.41e-14 | 4 |
thymic region | 2.41e-14 | 4 |
pharyngeal gland | 2.41e-14 | 4 |
thymus primordium | 2.41e-14 | 4 |
saliva-secreting gland | 4.97e-10 | 6 |
gland of oral region | 4.97e-10 | 6 |
gland of foregut | 4.97e-10 | 6 |
oral gland | 4.97e-10 | 6 |
oral cavity | 4.97e-10 | 6 |
pharyngeal epithelium | 7.10e-10 | 6 |
hemopoietic organ | 1.37e-08 | 7 |
immune organ | 1.37e-08 | 7 |
major salivary gland | 3.82e-08 | 2 |
midface | 3.82e-08 | 2 |
pituitary gland | 5.02e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.73e-15 | 1 |
lymphosarcoma | 4.73e-15 | 1 |