FFCP PHASE1:Hg19::chr12:122284799..122284838,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:122284799..122284838,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr12:122284799..122284838,- | |description=CAGE_peak_at_chr12:122284799..122284838,- | ||
|id=chr12:122284799..122284838,- | |id=chr12:122284799..122284838,- | ||
|ontology_enrichment_celltype=CL:0000182;1.94e-42;12!CL:0000319;2.75e-15;1!CL:0000159;2.67e-08;2 | |ontology_enrichment_celltype=CL:0000181!7.46e-15!12;CL:0000417!7.46e-15!12;CL:0000668!7.46e-15!12;CL:0000414!7.46e-15!12;CL:0000412!7.46e-15!12;CL:0000182!7.46e-15!12;CL:0000128!7.11e-08!7;CL:0000126!7.11e-08!7;CL:0000127!7.11e-08!7;CL:0002453!7.11e-08!7 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;1.94e-42;12!CL:0000319;2.75e-15;1!CL:0000159;2.67e-08;2 | ||
|ontology_enrichment_disease=DOID:3030;2.75e-15;1 | |ontology_enrichment_celltype_v019_2=CL:0000182,2.09e-42,12;CL:0000319,2.75e-15,1;CL:0000223,1.32e-08,58;CL:0000159,2.67e-08,2 | ||
|ontology_enrichment_uberon=UBERON:0002107;2.56e-47;19!UBERON:0006925;2.56e-47;19!UBERON:0002423;7.55e-36;25!UBERON:0002365;1.01e-27;31!UBERON:0002330;1.01e-27;31!UBERON:0002368;1.86e-24;33!UBERON:0000949;6.81e-18;43!UBERON:0005172;9.87e-11;52!UBERON:0005173;9.87e-11;52!UBERON:0002417;1.95e-09;58!UBERON:0000916;1.95e-09;58!UBERON:0002530;2.52e-09;57 | |ontology_enrichment_development_v019=UBERON:0004161;3.31e-32;11!UBERON:0009497;2.80e-27;13!UBERON:0001041;7.37e-12;30!UBERON:0003104;1.83e-11;31 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;2.75e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.75e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0002107!2.24e-18!19;UBERON:0006925!2.24e-18!19;UBERON:0008836!2.24e-18!19;UBERON:0008835!1.42e-15!22;UBERON:0003894!1.42e-15!22;UBERON:0009854!8.37e-15!23;UBERON:0007499!1.90e-13!25;UBERON:0009497!1.90e-13!25;UBERON:0000015!1.90e-13!25;UBERON:0002423!1.90e-13!25;UBERON:0006235!1.90e-13!25;UBERON:0004161!1.90e-13!25;UBERON:0005057!7.55e-13!26;UBERON:0009856!7.55e-13!26;UBERON:0001896!1.83e-11!3;UBERON:0005290!1.83e-11!3;UBERON:0010096!1.83e-11!3;UBERON:0002365!1.95e-10!31;UBERON:0002330!1.95e-10!31;UBERON:0004733!4.32e-10!12;UBERON:0002028!4.32e-10!12;UBERON:0007277!4.32e-10!12;UBERON:0004732!2.90e-09!13;UBERON:0002368!5.23e-09!35;UBERON:0003076!6.10e-08!15;UBERON:0003057!6.10e-08!15;UBERON:0005172!2.77e-07!55;UBERON:0005173!2.77e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.56e-47;19!UBERON:0006925;2.56e-47;19!UBERON:0002423;7.55e-36;25!UBERON:0002365;1.01e-27;31!UBERON:0002330;1.01e-27;31!UBERON:0002368;1.86e-24;33!UBERON:0000949;6.81e-18;43!UBERON:0005172;9.87e-11;52!UBERON:0005173;9.87e-11;52!UBERON:0002417;1.95e-09;58!UBERON:0000916;1.95e-09;58!UBERON:0002530;2.52e-09;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.72e-47,19;UBERON:0006925,2.72e-47,19;UBERON:0008836,2.72e-47,19;UBERON:0008835,8.83e-41,22;UBERON:0003894,8.83e-41,22;UBERON:0009854,5.49e-39,23;UBERON:0007499,7.91e-36,25;UBERON:0009497,7.91e-36,25;UBERON:0000015,7.91e-36,25;UBERON:0002423,7.91e-36,25;UBERON:0006235,7.91e-36,25;UBERON:0004161,7.91e-36,25;UBERON:0009856,1.97e-34,26;UBERON:0002365,8.58e-29,31;UBERON:0002330,8.58e-29,31;UBERON:0002368,1.94e-25,35;UBERON:0000949,1.18e-19,45;UBERON:0003929,2.85e-16,54;UBERON:0005172,2.85e-16,54;UBERON:0005173,2.85e-16,54;UBERON:0002530,7.77e-15,59;UBERON:0002417,1.41e-14,60;UBERON:0000916,1.41e-14,60;UBERON:0005911,1.78e-10,82;UBERON:0001041,7.85e-10,87;UBERON:0005177,2.31e-08,101;UBERON:0009569,1.83e-07,112;UBERON:0003914,4.12e-07,117;UBERON:0004921,5.59e-07,118;UBERON:0005256,8.69e-07,122 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.724232594804119,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.269662616320329,0,0.769494313892781,0,0,0,0,50.7020139287323,12.7767538168091,8.27105869353966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.77029665227245,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,6.68420985515132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481764225311099,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,1.74301541630384,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0,0,2.28471228690949,3.46146605200899,1.41547442093788,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0.179287339332845,0,0,0,0,0,0.864221491201268,0,0,0,0,0,9.67244742275344,7.95041333473328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.776503360757966,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,1.72041036127604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85997509083376,0.462175628631418,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:122284799..122284838,- | |short_description=p@chr12:122284799..122284838,- | ||
}} | }} |
Latest revision as of 06:01, 24 July 2015
Short description: | p@chr12:122284799..122284838, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122284799..122284838, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.09e-42 | 12 |
mucus secreting cell | 2.75e-15 | 1 |
endodermal cell | 1.32e-08 | 58 |
seromucus secreting cell | 2.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 2.72e-47 | 19 |
digestive gland | 2.72e-47 | 19 |
liver bud | 2.72e-47 | 19 |
hepatic diverticulum | 8.83e-41 | 22 |
liver primordium | 8.83e-41 | 22 |
digestive tract diverticulum | 5.49e-39 | 23 |
epithelial sac | 7.91e-36 | 25 |
epithelium of foregut-midgut junction | 7.91e-36 | 25 |
anatomical boundary | 7.91e-36 | 25 |
hepatobiliary system | 7.91e-36 | 25 |
foregut-midgut junction | 7.91e-36 | 25 |
septum transversum | 7.91e-36 | 25 |
sac | 1.97e-34 | 26 |
exocrine gland | 8.58e-29 | 31 |
exocrine system | 8.58e-29 | 31 |
endocrine gland | 1.94e-25 | 35 |
endocrine system | 1.18e-19 | 45 |
gut epithelium | 2.85e-16 | 54 |
abdomen element | 2.85e-16 | 54 |
abdominal segment element | 2.85e-16 | 54 |
gland | 7.77e-15 | 59 |
abdominal segment of trunk | 1.41e-14 | 60 |
abdomen | 1.41e-14 | 60 |
endo-epithelium | 1.78e-10 | 82 |
foregut | 7.85e-10 | 87 |
trunk region element | 2.31e-08 | 101 |
subdivision of trunk | 1.83e-07 | 112 |
epithelial tube | 4.12e-07 | 117 |
subdivision of digestive tract | 5.59e-07 | 118 |
trunk mesenchyme | 8.69e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.75e-15 | 1 |