FFCP PHASE1:Hg19::chr12:124870736..124870759,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:124870736..124870759,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr12:124870736..124870759,- | |description=CAGE_peak_at_chr12:124870736..124870759,- | ||
|id=chr12:124870736..124870759,- | |id=chr12:124870736..124870759,- | ||
|ontology_enrichment_celltype=CL:0000077!1.40e-11!19;CL:0000222!9.04e-10!119;CL:0000066!8.19e-08!254;CL:1000497!3.73e-07!18;CL:0002518!3.73e-07!18;CL:0000548!4.19e-07!679;CL:0000004!4.19e-07!679;CL:0000255!4.19e-07!679;CL:1000507!4.55e-07!12;CL:1000494!4.55e-07!12;CL:1000449!6.21e-07!16;CL:0000012!7.55e-07!682 | |ontology_enrichment_celltype=CL:0000077!1.40e-11!19;CL:0000222!9.04e-10!119;CL:0000066!8.19e-08!254;CL:1000497!3.73e-07!18;CL:0002518!3.73e-07!18;CL:0000548!4.19e-07!679;CL:0000004!4.19e-07!679;CL:0000255!4.19e-07!679;CL:1000507!4.55e-07!12;CL:1000494!4.55e-07!12;CL:1000449!6.21e-07!16;CL:0000012!7.55e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000077;8.92e-22;19!CL:0000359;1.15e-11;32!CL:0002541;1.25e-09;3!CL:0002539;4.80e-09;10!CL:0000039;8.86e-07;7!CL:0000586;8.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.06e-21,19;CL:0000359,1.78e-11,32;CL:0000222,2.40e-10,121;CL:0002541,1.50e-09,3;CL:0002539,2.67e-09,10;CL:0000076,1.64e-08,63;CL:0000192,8.55e-08,43;CL:0000514,8.55e-08,43;CL:0000039,7.77e-07,7;CL:0000586,7.77e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.27e-07,235;DOID:14566,6.92e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004573!1.36e-11!33;UBERON:0004571!1.36e-11!33;UBERON:0001637!1.72e-11!42;UBERON:0003509!1.72e-11!42;UBERON:0004572!1.72e-11!42;UBERON:0000947!6.49e-10!21;UBERON:0010191!6.49e-10!21;UBERON:0003914!4.46e-09!118;UBERON:0001851!3.79e-07!16;UBERON:0009773!4.55e-07!12;UBERON:0001231!4.55e-07!12;UBERON:0004810!4.55e-07!12;UBERON:0004211!6.21e-07!16;UBERON:0001285!6.21e-07!16;UBERON:0007684!6.21e-07!16;UBERON:0003220!6.21e-07!16;UBERON:0004208!6.21e-07!16;UBERON:0005631!9.92e-07!14;UBERON:0000158!9.92e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.00e-13;10!UBERON:0000158;2.00e-13;10!UBERON:0003124;1.25e-09;3!UBERON:0000920;1.25e-09;3!UBERON:0004237;4.80e-09;10!UBERON:0004695;4.80e-09;10!UBERON:0002111;4.80e-09;10!UBERON:0004178;4.80e-09;10!UBERON:0004573;5.96e-08;33!UBERON:0004571;5.96e-08;33!UBERON:0001637;2.99e-07;42!UBERON:0003509;2.99e-07;42!UBERON:0004572;2.99e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.55e-12,14;UBERON:0000158,4.55e-12,14;UBERON:0001637,6.79e-11,42;UBERON:0003509,6.79e-11,42;UBERON:0004572,6.79e-11,42;UBERON:0000920,1.50e-09,3;UBERON:0004573,2.55e-09,33;UBERON:0004571,2.55e-09,33;UBERON:0004237,2.67e-09,10;UBERON:0004695,2.67e-09,10;UBERON:0002111,2.67e-09,10;UBERON:0004178,2.67e-09,10;UBERON:0003498,2.42e-08,5;UBERON:0005985,2.42e-08,5;UBERON:0003124,5.45e-07,7;UBERON:0007500,8.84e-07,59;UBERON:0001981,8.84e-07,59;UBERON:0004537,8.84e-07,59;UBERON:0006965,8.84e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,1.09220686065086,0.791300934685361,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,1.72046919021225,0.694281003215189,0.56530794192401,0,0,0,0,0,0,0,0,0,0.367663080345869,0.81014194788176,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.397227542439656,0.286836620748814,0.354668382198357,0,4.2699598291882,2.4666754841716,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,1.02088964844019,0.717558542755448,0.213557388818567,0,0.900273288253207,0,0.257640540045629,0.18611685633159,1.5189869901714,0.68205903612839,0,0,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.330881918197182,0.435758888184812,0.949082476444386,0,0.588664395376038,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.24782516918484,0.535286966391485,0.473107245101804,1.28855556491985,0,0,1.03473071292505,0,0,0,0,0.343143423810856,0,0,0,0.303127571446259,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.384417447767103,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.410635780069046,0.519254429183621,0.348631135379878,0,0,0,0.229628896329213,0.546273504020151,0,0.902399225814824,0.539107359730903,3.13739907670742,0,0.527758144464379,0,0.680374821106063,0.863663664408557,0,1.08378575017541,2.00675909541941,0.254876273045038,1.66215201785745,0.895499018888713,0,0,0.256450125116389,0,0.976135183992909,0.9273691048295,0.0915694648183434,0.082509499920588,0,0,0,0.290012154876366,0.154048617114644,0,0.413509717453592,0.107420244868274,0,0.170453254832202,0.445160178233687,0,0.192190067365106,0,0,1.85938219718914,1.5740617341532,3.485186350803,1.54016790088044,1.06461206063404,1.73986598415015,0,0,0,0.632758849437452,0,0,0,0.318203247925937,5.49464048139461,0,0,0,1.01091240786658,0,2.52755073743389,0,0.243713489631284,1.05650146756755,0.272999822815972,0,1.13008116620243,4.41092274836899,0,0,0,0,0,0.30982349809975,2.53526042279017,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.92359005739301,1.48482340416319,5.22173193568695,0,0,0.222617410045812,0,0,0,0.276283915531148,0,0.102268682502155,0,1.24415835064723,1.07842021376792,0.895105873378046,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,2.3056390438806,2.15418346583453,21.6208270124796,20.4160742228428,1.19076871422421,38.3785038733417,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,1.32930774541437,0.330991955875499,1.2557316736289,0,0,0,0,0,3.3082498500553,0,0,0,0.0730893170861856,0,0,0,0,1.23337732182076,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0,0,0,5.21860649374817,0.235694034616795,0.951329442515298,1.77824838730966,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,1.47840471127169,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0,28.28441161638,0,0,0,0,0,0.171086837884329,1.40963004463334,0.106787412567695,0.943225830597996,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.895528817321244,0.467426619694449,0,0,0,0,0,0,0.310874401165561,0.295710299979268,2.07085797312813,0,0.776314784381297,0.829412415681711,0.797525143673985,0.521745061811734,0.300515217994437,1.14241563650639,0.813741466409323,0,0.751873899297419,0,1.19428766609585,1.20008329398946,0.343395705182793,0,0,1.92619830407303,2.35885750512418,1.04397716786085,4.0807066592209,0.231522474323834,1.95789363605174,1.07453304648892,4.63202170741458,1.09642024789354,4.41722864864703,3.08662461233464,1.68942440653073,1.02496607435179,0.345430341731199,2.43087964941906,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,1.76665893301846,0,0,2.54156465530744,0,1.3807198521202,0,0,0,0,2.09525355585138,0.163771917510097,1.18284868973636,0,0,0,0.0634158101939068,0,0,0,0,0.511049710558381,0,0,0,0,4.3464161379693,0,0,0,0.0657727735628491,0.4727753635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| ||
|short_description=p@chr12:124870736..124870759,- | |short_description=p@chr12:124870736..124870759,- | ||
}} | }} |
Latest revision as of 06:22, 24 July 2015
Short description: | p@chr12:124870736..124870759, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:124870736..124870759, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.06e-21 | 19 |
vascular associated smooth muscle cell | 1.78e-11 | 32 |
mesodermal cell | 2.40e-10 | 121 |
chorionic membrane mesenchymal stem cell | 1.50e-09 | 3 |
aortic smooth muscle cell | 2.67e-09 | 10 |
squamous epithelial cell | 1.64e-08 | 63 |
smooth muscle cell | 8.55e-08 | 43 |
smooth muscle myoblast | 8.55e-08 | 43 |
germ line cell | 7.77e-07 | 7 |
germ cell | 7.77e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.55e-12 | 14 |
membranous layer | 4.55e-12 | 14 |
artery | 6.79e-11 | 42 |
arterial blood vessel | 6.79e-11 | 42 |
arterial system | 6.79e-11 | 42 |
egg chorion | 1.50e-09 | 3 |
systemic artery | 2.55e-09 | 33 |
systemic arterial system | 2.55e-09 | 33 |
blood vessel smooth muscle | 2.67e-09 | 10 |
arterial system smooth muscle | 2.67e-09 | 10 |
artery smooth muscle tissue | 2.67e-09 | 10 |
aorta smooth muscle tissue | 2.67e-09 | 10 |
heart blood vessel | 2.42e-08 | 5 |
coronary vessel | 2.42e-08 | 5 |
chorion | 5.45e-07 | 7 |
epithelial tube open at both ends | 8.84e-07 | 59 |
blood vessel | 8.84e-07 | 59 |
blood vasculature | 8.84e-07 | 59 |
vascular cord | 8.84e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.27e-07 | 235 |
disease of cellular proliferation | 6.92e-07 | 239 |