FFCP PHASE1:Hg19::chr12:127256858..127256871,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000542248_5end | |association_with_transcript=30bp_to_ENST00000542248_5end | ||
|cluster_id=chr12:127256858..127256871,- | |||
|coexpression_cluster_id=C429 | |coexpression_cluster_id=C429 | ||
|description=CAGE_peak_1_at_ENST00000542248_5end | |description=CAGE_peak_1_at_ENST00000542248_5end | ||
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|ontology_enrichment_celltype=CL:0000838!4.70e-11!52;CL:0000542!9.99e-11!53;CL:0000051!9.99e-11!53;CL:0000791!1.65e-10!18;CL:0000789!1.65e-10!18;CL:0002420!1.65e-10!18;CL:0002419!1.65e-10!18;CL:0000790!1.65e-10!18;CL:0000084!1.34e-09!25;CL:0000827!1.34e-09!25;CL:0000625!2.31e-07!11;CL:0000623!5.77e-07!3;CL:0000825!5.77e-07!3 | |ontology_enrichment_celltype=CL:0000838!4.70e-11!52;CL:0000542!9.99e-11!53;CL:0000051!9.99e-11!53;CL:0000791!1.65e-10!18;CL:0000789!1.65e-10!18;CL:0002420!1.65e-10!18;CL:0002419!1.65e-10!18;CL:0000790!1.65e-10!18;CL:0000084!1.34e-09!25;CL:0000827!1.34e-09!25;CL:0000625!2.31e-07!11;CL:0000623!5.77e-07!3;CL:0000825!5.77e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;4.31e-25;3!CL:0000319;1.18e-19;1!CL:0000895;2.97e-19;1!CL:0000624;6.12e-13;6!CL:0000159;1.64e-10;2!CL:0002535;2.60e-10;2!CL:0000898;2.71e-07;3!CL:0000767;2.71e-07;3 | |ontology_enrichment_celltype_v019=CL:0000623;4.31e-25;3!CL:0000319;1.18e-19;1!CL:0000895;2.97e-19;1!CL:0000624;6.12e-13;6!CL:0000159;1.64e-10;2!CL:0002535;2.60e-10;2!CL:0000898;2.71e-07;3!CL:0000767;2.71e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.38e-25,3;CL:0000825,3.38e-25,3;CL:0000319,1.30e-19,1;CL:0000810,3.91e-19,1;CL:0000895,3.91e-19,1;CL:0002436,3.91e-19,1;CL:0002427,3.91e-19,1;CL:0002428,3.91e-19,1;CL:0002429,3.91e-19,1;CL:0002433,3.91e-19,1;CL:0002431,3.91e-19,1;CL:0002432,3.91e-19,1;CL:0000624,7.78e-13,6;CL:0000159,1.72e-10,2;CL:0002535,2.07e-10,2;CL:0000893,2.99e-10,2;CL:0002489,2.99e-10,2;CL:0000809,2.99e-10,2;CL:0000808,2.99e-10,2;CL:0000894,2.99e-10,2;CL:0000806,2.99e-10,2;CL:0000807,2.99e-10,2;CL:0000805,2.99e-10,2;CL:0002425,2.99e-10,2;CL:0000767,2.79e-07,3;CL:0000898,2.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002427;2.97e-19;1!CL:0002425;2.60e-10;2 | |ontology_enrichment_development_v019=CL:0002427;2.97e-19;1!CL:0002425;2.60e-10;2 | ||
|ontology_enrichment_disease=DOID:120!4.70e-09!27;DOID:193!3.46e-08!29;DOID:1749!8.51e-07!14 | |ontology_enrichment_disease=DOID:120!4.70e-09!27;DOID:193!3.46e-08!29;DOID:1749!8.51e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3030;1.18e-19;1 | |ontology_enrichment_disease_v019=DOID:3030;1.18e-19;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,1.30e-19,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.60e-10;2!UBERON:0004801;2.60e-10;2 | |ontology_enrichment_uberon_v019=UBERON:0006955;2.60e-10;2!UBERON:0004801;2.60e-10;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.07e-10,2;UBERON:0004801,2.07e-10,2;UBERON:0009722,1.51e-07,11;UBERON:0007690,1.51e-07,11 | |||
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| ||
|short_description=p1@ENST00000542248 | |short_description=p1@ENST00000542248 | ||
}} | }} |
Latest revision as of 06:35, 24 July 2015
Short description: | p1@ENST00000542248 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000542248_5end |
Coexpression cluster: | C429_anaplastic_Mast_clear_Neutrophils_squamous_Eosinophils_oral |
Association with transcript: | 30bp_to_ENST00000542248_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.38e-25 | 3 |
pro-NK cell | 3.38e-25 | 3 |
mucus secreting cell | 1.30e-19 | 1 |
CD4-positive, alpha-beta thymocyte | 3.91e-19 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.91e-19 | 1 |
mature CD4 single-positive thymocyte | 3.91e-19 | 1 |
resting double-positive thymocyte | 3.91e-19 | 1 |
double-positive blast | 3.91e-19 | 1 |
CD69-positive double-positive thymocyte | 3.91e-19 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.91e-19 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.91e-19 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.91e-19 | 1 |
CD4-positive, alpha-beta T cell | 7.78e-13 | 6 |
seromucus secreting cell | 1.72e-10 | 2 |
epithelial cell of cervix | 2.07e-10 | 2 |
thymocyte | 2.99e-10 | 2 |
double negative thymocyte | 2.99e-10 | 2 |
double-positive, alpha-beta thymocyte | 2.99e-10 | 2 |
DN4 thymocyte | 2.99e-10 | 2 |
DN1 thymic pro-T cell | 2.99e-10 | 2 |
DN2 thymocyte | 2.99e-10 | 2 |
DN3 thymocyte | 2.99e-10 | 2 |
immature single positive thymocyte | 2.99e-10 | 2 |
early T lineage precursor | 2.99e-10 | 2 |
basophil | 2.79e-07 | 3 |
naive T cell | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.07e-10 | 2 |
cervix epithelium | 2.07e-10 | 2 |
entire pharyngeal arch endoderm | 1.51e-07 | 11 |
early pharyngeal endoderm | 1.51e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.30e-19 | 1 |