FFCP PHASE1:Hg19::chr12:16827929..16827935,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:16827929..16827935,+ | |||
|description=CAGE_peak_at_chr12:16827929..16827935,+ | |description=CAGE_peak_at_chr12:16827929..16827935,+ | ||
|id=chr12:16827929..16827935,+ | |id=chr12:16827929..16827935,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002623;5.97e-11;3!CL:1001319;4.88e-09;1!CL:1000600;4.88e-09;1!CL:0002601;1.22e-08;1!CL:0000622;6.64e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,7.30e-11,3;CL:1001319,5.70e-09,1;CL:1000600,5.70e-09,1;CL:0002601,1.05e-08,1;CL:0000622,7.48e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.88e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!3.02e-07!25;UBERON:0000015!3.02e-07!25;UBERON:0002423!3.02e-07!25;UBERON:0006235!3.02e-07!25;UBERON:0004161!3.02e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.33e-10;25!UBERON:0002134;4.88e-09;1!UBERON:0004645;4.88e-09;1!UBERON:0005208;4.88e-09;1!UBERON:0004145;4.88e-09;1!UBERON:0005946;4.88e-09;1!UBERON:0001256;4.88e-09;1!UBERON:0005965;4.88e-09;1!UBERON:0001259;4.88e-09;1!UBERON:0002078;4.88e-09;1!UBERON:0004913;1.22e-08;1!UBERON:0003703;1.22e-08;1!UBERON:0001174;1.22e-08;1!UBERON:0004914;1.22e-08;1!UBERON:0002365;2.29e-08;31!UBERON:0002330;2.29e-08;31!UBERON:0002394;3.10e-08;4!UBERON:0003928;3.10e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,6.60e-12,22;UBERON:0003894,6.60e-12,22;UBERON:0009854,2.29e-11,23;UBERON:0007499,2.04e-10,25;UBERON:0009497,2.04e-10,25;UBERON:0000015,2.04e-10,25;UBERON:0002423,2.04e-10,25;UBERON:0006235,2.04e-10,25;UBERON:0004161,2.04e-10,25;UBERON:0009856,5.37e-10,26;UBERON:0004645,5.70e-09,1;UBERON:0001256,5.70e-09,1;UBERON:0001259,5.70e-09,1;UBERON:0002134,6.16e-09,1;UBERON:0005208,6.16e-09,1;UBERON:0005946,6.16e-09,1;UBERON:0005965,6.16e-09,1;UBERON:0002078,6.16e-09,1;UBERON:0004913,1.78e-08,1;UBERON:0003703,1.78e-08,1;UBERON:0001174,1.78e-08,1;UBERON:0004914,1.78e-08,1;UBERON:0002365,2.40e-08,31;UBERON:0002330,2.40e-08,31 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0.759059076058509,0,0,0.950452044448374,0,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0,0,0.289693037921647,0,0,0.189069634328136,0,0.351339142772504,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.563057402416611,0,0,0,0,0,0,0.993943903390637,0,0.397227542439656,0.286836620748814,0,0,0,0,0.622422070799533,0.67355336034844,0.490385709340376,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0.816616685019573,0.737005903870608,0.516628905878827,0,0,0,0,0.841680569770331,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0.504867548488229,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0,0,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,1.77236972004421,0,0.368965315629341,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0,0.570762456703795,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0.167516265334349,1.91381625495949,0,0,0,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0.247528499761764,0,0,0,0.096670718292122,0.616194468458578,0.921022048356777,0.413509717453592,1.07420244868274,0.145016693914229,0.0852266274161009,0.267096106940212,0,0,0.765676274967505,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.719489830333259,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,1.41904425628239,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,1.46508179271894,0,0.111443384277478,0,0,0.296964680832639,0,0.994147647766298,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0.449341755736634,1.61119057208048,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.349839999984783,0,1.0241410345695,0.508507300585533,0,0.344743373241465,0,0.347249989866585,0,0.241192877250816,0,0.110579259931225,0,0,0.10893846351899,0,0,0,0.23056390438806,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,1.20990716048664,0,0.252746318513952,0,0,0,0.661983911750998,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0.586654148204409,0.561111741760736,0,0,0,0,0.343189995723929,0.14405479798815,1.24252535565433,0,0,0,0.203996435272644,0,0.600420288709789,0.684526894459965,0,0,0,0.279282401272254,0.229160424011684,2.15361907373044,0,0.429226048136571,0,0,0,3.49487848582361,0.0787831823072236,0,0,0.984274815147488,0.0846733320657845,0,0.272406812223151,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0.422401346077626,0.179287339332845,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0.732761168390412,6.62534444561107,0.129282956361551,0.39669780522807,0.684347351537318,0.704815022316672,0.213574825135389,0,0,0,1.58089305518355,0,0.638341257770182,0.544017803369474,1.2534494701135,0,0.983617892129413,0.157054096250234,0,0.244052529803926,0,0,0.887432412294818,0.18628920882415,8.992661270855,0,0,0,0.235265819698172,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0.378806010550178,0,0,0,0.453692771289717,0.15543720058278,0,0,0.449803112163605,0,0.414706207840855,0.265841714557995,0,0.450772826991655,0,0.406870733204662,0.181848659202559,0.429642228169954,0.928067519756987,0,0,0,0,0,0,0.214441591374926,0,0.453411851024545,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0.276516872303462,0,0.132864840313363,0.327130788511688,0,0.245772908753719,0,0.19998739585493,0.213383459388282,0,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0.247871528518004,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,1.18284868973636,0.0675375846183947,0,0.2066867965011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| ||
|short_description=p@chr12:16827929..16827935,+ | |short_description=p@chr12:16827929..16827935,+ | ||
}} | }} |
Latest revision as of 07:17, 24 July 2015
Short description: | p@chr12:16827929..16827935, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:16827929..16827935, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 7.30e-11 | 3 |
bladder cell | 5.70e-09 | 1 |
lower urinary tract cell | 5.70e-09 | 1 |
uterine smooth muscle cell | 1.05e-08 | 1 |
acinar cell | 7.48e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 6.60e-12 | 22 |
liver primordium | 6.60e-12 | 22 |
digestive tract diverticulum | 2.29e-11 | 23 |
epithelial sac | 2.04e-10 | 25 |
epithelium of foregut-midgut junction | 2.04e-10 | 25 |
anatomical boundary | 2.04e-10 | 25 |
hepatobiliary system | 2.04e-10 | 25 |
foregut-midgut junction | 2.04e-10 | 25 |
septum transversum | 2.04e-10 | 25 |
sac | 5.37e-10 | 26 |
urinary bladder urothelium | 5.70e-09 | 1 |
wall of urinary bladder | 5.70e-09 | 1 |
mucosa of urinary bladder | 5.70e-09 | 1 |
tricuspid valve | 6.16e-09 | 1 |
right atrium valve | 6.16e-09 | 1 |
outflow tract of atrium | 6.16e-09 | 1 |
outflow part of right atrium | 6.16e-09 | 1 |
right cardiac atrium | 6.16e-09 | 1 |
hepatopancreatic ampulla | 1.78e-08 | 1 |
extrahepatic bile duct | 1.78e-08 | 1 |
common bile duct | 1.78e-08 | 1 |
duodenal papilla | 1.78e-08 | 1 |
exocrine gland | 2.40e-08 | 31 |
exocrine system | 2.40e-08 | 31 |