FFCP PHASE1:Hg19::chr12:25055177..25055258,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=586 | |EntrezGene=entrezgene:586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=976 | |HGNC=HGNC:976 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q68DQ7 | |UniProt=uniprot:Q68DQ7 | ||
|association_with_transcript=0bp_to_ENST00000538118_5end | |association_with_transcript=0bp_to_ENST00000538118_5end | ||
|cluster_id=chr12:25055177..25055258,- | |||
|coexpression_cluster_id=C128 | |coexpression_cluster_id=C128 | ||
|description=CAGE_peak_5_at_BCAT1_5end | |description=CAGE_peak_5_at_BCAT1_5end | ||
Revision as of 07:42, 24 July 2015
| Short description: | p5@BCAT1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_BCAT1_5end |
| Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
| Association with transcript: | 0bp_to_ENST00000538118_5end |
| EntrezGene: | 586 |
| HGNC: | 976 |
| UniProt: | Q68DQ7 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@BCAT1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endothelial cell | 8.23e-35 | 36 |
| endothelial cell of vascular tree | 1.42e-30 | 24 |
| defensive cell | 2.56e-30 | 48 |
| phagocyte | 2.56e-30 | 48 |
| monopoietic cell | 7.70e-29 | 59 |
| monocyte | 7.70e-29 | 59 |
| monoblast | 7.70e-29 | 59 |
| promonocyte | 7.70e-29 | 59 |
| macrophage dendritic cell progenitor | 2.01e-27 | 61 |
| meso-epithelial cell | 2.25e-25 | 45 |
Showing 1 to 10 of 31 entries
| Ontology term | p-value | n |
|---|---|---|
| blood vessel endothelium | 4.55e-23 | 18 |
| endothelium | 4.55e-23 | 18 |
| cardiovascular system endothelium | 4.55e-23 | 18 |
| immune system | 5.70e-20 | 93 |
| nervous system | 1.90e-19 | 89 |
| bone marrow | 2.99e-19 | 76 |
| simple squamous epithelium | 1.11e-17 | 22 |
| central nervous system | 7.14e-17 | 81 |
| bone element | 7.37e-17 | 82 |
| telencephalon | 1.63e-16 | 34 |
Showing 1 to 10 of 58 entries
