FFCP PHASE1:Hg19::chr12:32480585..32480601,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:32480585..32480601,+ to FFCP PHASE1:Hg19::chr12:32480585..32480601,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:32480585..32480601,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_at_chr12:32480585..32480601,+ | |||
|id=chr12:32480585..32480601,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.54e-16;7!CL:0000586;5.54e-16;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.01e-16,7;CL:0000586,5.01e-16,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.30e-11;10!UBERON:0005564;2.30e-11;10 | |||
|ontology_enrichment_disease=DOID:14566!1.69e-09!239;DOID:162!6.60e-09!235;DOID:0050687!1.65e-07!143;DOID:193!9.03e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.59e-08;14!DOID:154;3.92e-07;2!DOID:4236;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.94e-08,14;DOID:154,3.70e-07,2;DOID:4236,3.70e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000956!2.87e-08!25;UBERON:0000203!2.87e-08!25;UBERON:0001950!4.83e-08!20;UBERON:0002619!5.47e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.62e-14;8!UBERON:0003135;2.21e-10;11!UBERON:0000991;2.66e-09;21!UBERON:0001897;3.92e-07;2!UBERON:0010225;3.92e-07;2!UBERON:0000922;8.47e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.23e-14,8;UBERON:0003135,2.08e-10,11;UBERON:0000991,2.38e-09,21;UBERON:0009196,2.38e-09,21;UBERON:0009117,2.38e-09,21;UBERON:0005564,2.38e-09,21;UBERON:0004176,6.22e-09,22;UBERON:0001897,3.09e-07,2;UBERON:0010225,3.09e-07,2 | |||
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| ||
|short_description=p@chr12:32480585..32480601,+ | |||
}} | }} |
Latest revision as of 08:12, 24 July 2015
Short description: | p@chr12:32480585..32480601, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:32480585..32480601, + |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.01e-16 | 7 |
germ cell | 5.01e-16 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 4.23e-14 | 8 |
male reproductive organ | 2.08e-10 | 11 |
gonad | 2.38e-09 | 21 |
indifferent external genitalia | 2.38e-09 | 21 |
indifferent gonad | 2.38e-09 | 21 |
gonad primordium | 2.38e-09 | 21 |
external genitalia | 6.22e-09 | 22 |
dorsal plus ventral thalamus | 3.09e-07 | 2 |
thalamic complex | 3.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.94e-08 | 14 |
mixed cell type cancer | 3.70e-07 | 2 |
carcinosarcoma | 3.70e-07 | 2 |