FFCP PHASE1:Hg19::chr12:51636570..51636602,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:51636570..51636602,+ | |||
|coexpression_cluster_id=C469 | |||
|description=CAGE_peak_at_chr12:51636570..51636602,+ | |description=CAGE_peak_at_chr12:51636570..51636602,+ | ||
|id=chr12:51636570..51636602,+ | |id=chr12:51636570..51636602,+ | ||
|ontology_enrichment_celltype=CL:0000766!7.11e-25!76;CL:0002057!3.48e-23!42;CL:0000557!5.94e-23!71;CL:0000839!2.40e-22!70;CL:0000860!7.20e-22!45;CL:0002009!2.99e-21!65;CL:0002194!3.40e-20!63;CL:0000576!3.40e-20!63;CL:0000040!3.40e-20!63;CL:0000559!3.40e-20!63;CL:0000738!6.08e-20!140;CL:0000763!2.97e-19!112;CL:0000049!2.97e-19!112;CL:0002031!1.99e-17!124;CL:0002032!3.37e-16!165;CL:0000837!3.37e-16!165;CL:0000037!3.44e-16!172;CL:0000566!3.44e-16!172;CL:0002087!2.12e-14!119;CL:0000988!9.99e-14!182 | |ontology_enrichment_celltype=CL:0000766!7.11e-25!76;CL:0002057!3.48e-23!42;CL:0000557!5.94e-23!71;CL:0000839!2.40e-22!70;CL:0000860!7.20e-22!45;CL:0002009!2.99e-21!65;CL:0002194!3.40e-20!63;CL:0000576!3.40e-20!63;CL:0000040!3.40e-20!63;CL:0000559!3.40e-20!63;CL:0000738!6.08e-20!140;CL:0000763!2.97e-19!112;CL:0000049!2.97e-19!112;CL:0002031!1.99e-17!124;CL:0002032!3.37e-16!165;CL:0000837!3.37e-16!165;CL:0000037!3.44e-16!172;CL:0000566!3.44e-16!172;CL:0002087!2.12e-14!119;CL:0000988!9.99e-14!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.90e-32;33!CL:0002057;2.90e-32;33!CL:0000473;6.78e-26;39!CL:0000234;6.78e-26;39!CL:0000576;3.55e-20;48!CL:0000766;4.74e-19;69!CL:0000763;1.08e-08;100!CL:0000738;9.83e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.48e-38,42;CL:0002057,4.48e-38,42;CL:0000473,1.11e-37,48;CL:0000234,1.11e-37,48;CL:0000766,8.42e-35,72;CL:0000557,7.27e-32,67;CL:0000839,2.22e-29,66;CL:0002009,2.80e-28,61;CL:0002194,1.45e-26,59;CL:0000576,1.45e-26,59;CL:0000040,1.45e-26,59;CL:0000559,1.45e-26,59;CL:0000763,2.64e-26,108;CL:0000049,2.64e-26,108;CL:0000738,7.92e-23,136;CL:0002031,6.71e-20,120;CL:0002032,1.65e-19,161;CL:0000837,1.65e-19,161;CL:0000037,1.18e-17,168;CL:0000988,1.60e-15,177;CL:0002087,5.60e-15,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-27;42!CL:0000049;3.03e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.48e-19!80;UBERON:0001474!3.27e-17!86;UBERON:0002390!9.60e-17!102;UBERON:0003061!9.60e-17!102;UBERON:0002193!9.95e-16!112;UBERON:0002405!3.39e-15!115;UBERON:0004765!5.55e-13!101;UBERON:0001434!5.55e-13!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.29e-26,76;UBERON:0001474,1.95e-23,82;UBERON:0002405,7.50e-22,93;UBERON:0004765,1.82e-20,90;UBERON:0002390,2.55e-20,98;UBERON:0003061,2.55e-20,98;UBERON:0002193,1.23e-19,108;UBERON:0001434,4.91e-19,100;UBERON:0002204,4.57e-07,167 | |||
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| ||
|short_description=p@chr12:51636570..51636602,+ | |short_description=p@chr12:51636570..51636602,+ | ||
}} | }} |
Latest revision as of 09:20, 24 July 2015
Short description: | p@chr12:51636570..51636602, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:51636570..51636602, + |
Coexpression cluster: | C469_Neutrophils_Monocytederived_CD14_CD19_Eosinophils_blood_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.48e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.48e-38 | 42 |
defensive cell | 1.11e-37 | 48 |
phagocyte | 1.11e-37 | 48 |
myeloid leukocyte | 8.42e-35 | 72 |
granulocyte monocyte progenitor cell | 7.27e-32 | 67 |
myeloid lineage restricted progenitor cell | 2.22e-29 | 66 |
macrophage dendritic cell progenitor | 2.80e-28 | 61 |
monopoietic cell | 1.45e-26 | 59 |
monocyte | 1.45e-26 | 59 |
monoblast | 1.45e-26 | 59 |
promonocyte | 1.45e-26 | 59 |
myeloid cell | 2.64e-26 | 108 |
common myeloid progenitor | 2.64e-26 | 108 |
leukocyte | 7.92e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 6.71e-20 | 120 |
hematopoietic oligopotent progenitor cell | 1.65e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.65e-19 | 161 |
hematopoietic stem cell | 1.18e-17 | 168 |
hematopoietic cell | 1.60e-15 | 177 |
nongranular leukocyte | 5.60e-15 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.29e-26 | 76 |
bone element | 1.95e-23 | 82 |
immune system | 7.50e-22 | 93 |
skeletal element | 1.82e-20 | 90 |
hematopoietic system | 2.55e-20 | 98 |
blood island | 2.55e-20 | 98 |
hemolymphoid system | 1.23e-19 | 108 |
skeletal system | 4.91e-19 | 100 |
musculoskeletal system | 4.57e-07 | 167 |