FFCP PHASE1:Hg19::chr12:72451186..72451196,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_ENST00000548885_5end | |||
|cluster_id=chr12:72451186..72451196,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_4_at_ENST00000548885_5end | |||
|id=chr12:72451186..72451196,- | |||
|ontology_enrichment_celltype=CL:0000077!4.87e-36!19;CL:0002097!9.32e-16!2;CL:0002537!4.68e-14!5;CL:0000076!3.92e-12!62;CL:0000213!6.39e-11!57;CL:0000215!6.39e-11!57;CL:0000174!8.26e-11!3;CL:0002541!2.49e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;9.21e-45;5!CL:0002097;8.82e-14;2!CL:0000077;1.84e-12;19!CL:0000349;2.19e-12;19!CL:0000174;1.24e-09;3!CL:0000076;9.47e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,8.55e-45,5;CL:0002097,9.40e-14,2;CL:0000077,1.99e-12,19;CL:0000349,2.15e-12,19;CL:0000174,1.30e-09,3;CL:0000076,9.84e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3369!1.48e-08!1;DOID:3111!2.64e-08!1;DOID:3603!2.64e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.96e-24!14;UBERON:0000158!1.96e-24!14;UBERON:0000305!4.96e-17!7;UBERON:0004871!6.31e-15!8;UBERON:0000478!6.25e-14!24;UBERON:0002369!8.26e-11!3;UBERON:0001235!8.26e-11!3;UBERON:0006858!8.26e-11!3;UBERON:0000476!2.49e-10!3;UBERON:0000920!2.49e-10!3;UBERON:0003124!1.21e-09!7;UBERON:0002426!1.02e-08!1;UBERON:0003831!1.02e-08!1;UBERON:0003898!1.02e-08!1;UBERON:0004830!1.02e-08!1;UBERON:0001774!1.02e-08!1;UBERON:0003830!1.02e-08!1;UBERON:0005175!1.02e-08!1;UBERON:0003897!1.02e-08!1;UBERON:0001103!1.02e-08!1;UBERON:0010084!1.02e-08!1;UBERON:0004923!5.88e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;3.02e-32;7!UBERON:0005631;7.74e-23;10!UBERON:0000158;7.74e-23;10!UBERON:0000478;6.01e-10;24!UBERON:0002369;1.24e-09;3!UBERON:0001235;1.24e-09;3!UBERON:0006858;1.24e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.86e-32,7;UBERON:0004871,2.38e-28,8;UBERON:0005631,1.48e-16,14;UBERON:0000158,1.48e-16,14;UBERON:0000478,5.92e-10,24;UBERON:0002369,1.30e-09,3;UBERON:0001235,1.30e-09,3;UBERON:0006858,1.30e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,1.68203280042692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,1.18785872333055,2.45728561679386,0,0,0,0,9.50064336575971,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,2.35885750512418,0,0.226705925512272,3.47283711485751,0,0,0.308801447160972,0.657852148736121,0,1.15748422962549,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@ENST00000548885 | |||
}} |
Latest revision as of 12:16, 24 July 2015
Short description: | p4@ENST00000548885 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000548885_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -29bp_to_ENST00000548885_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 8.55e-45 | 5 |
cortical cell of adrenal gland | 9.40e-14 | 2 |
mesothelial cell | 1.99e-12 | 19 |
extraembryonic cell | 2.15e-12 | 19 |
steroid hormone secreting cell | 1.30e-09 | 3 |
squamous epithelial cell | 9.84e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.86e-32 | 7 |
somatic layer of lateral plate mesoderm | 2.38e-28 | 8 |
extraembryonic membrane | 1.48e-16 | 14 |
membranous layer | 1.48e-16 | 14 |
extraembryonic structure | 5.92e-10 | 24 |
adrenal gland | 1.30e-09 | 3 |
adrenal cortex | 1.30e-09 | 3 |
adrenal/interrenal gland | 1.30e-09 | 3 |