FFCP PHASE1:Hg19::chr12:76056397..76056405,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:76056397..76056405,- | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr12:76056397..76056405,- | |||
|id=chr12:76056397..76056405,- | |||
|ontology_enrichment_celltype=CL:0000183!7.98e-12!59;CL:0000680!5.14e-11!57;CL:0000056!5.14e-11!57;CL:0000355!5.14e-11!57;CL:0000055!1.08e-10!180;CL:0000187!1.37e-09!54;CL:1000306!8.61e-09!4;CL:0002547!8.61e-09!4;CL:0000393!3.89e-08!60;CL:0000211!3.89e-08!60;CL:0002564!1.31e-07!3;CL:0000188!4.80e-07!9;CL:0002590!6.33e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000569;4.69e-19;4!CL:0002549;1.34e-17;2!CL:0002564;4.72e-12;3!CL:0002573;8.21e-12;2!CL:0002591;1.76e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,4.28e-19,4;CL:0000011,4.28e-19,4;CL:0002549,1.23e-17,2;CL:0002564,6.59e-12,3;CL:0002573,9.18e-12,2;CL:0002591,1.91e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000011;4.69e-19;4 | |||
|ontology_enrichment_disease=DOID:2394!3.13e-08!14;DOID:120!9.89e-07!27 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!8.01e-14!11;UBERON:0006876!8.01e-14!11;UBERON:0005284!4.93e-11!5;UBERON:0001134!6.37e-10!61;UBERON:0002036!6.37e-10!61;UBERON:0003082!6.37e-10!61;UBERON:0002385!1.97e-09!63;UBERON:0001015!1.97e-09!63;UBERON:0000383!1.97e-09!63;UBERON:0000415!8.61e-09!4;UBERON:0007240!8.61e-09!4;UBERON:0005742!8.61e-09!4;UBERON:0005734!8.61e-09!4;UBERON:0004664!8.61e-09!4;UBERON:0004663!8.61e-09!4;UBERON:0002119!2.75e-08!4;UBERON:0004531!2.75e-08!4;UBERON:0000488!5.24e-08!4;UBERON:0004290!5.99e-08!70;UBERON:0002242!1.31e-07!3;UBERON:0003068!1.31e-07!3;UBERON:0002328!1.31e-07!3;UBERON:0004880!1.31e-07!3;UBERON:0000914!1.60e-07!83;UBERON:0002329!1.60e-07!83;UBERON:0003077!1.60e-07!83;UBERON:0003059!1.60e-07!83;UBERON:0007282!1.60e-07!83;UBERON:0009618!1.60e-07!83;UBERON:0007285!1.60e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.34e-17;2!UBERON:0005358;1.34e-17;2!UBERON:0001886;1.34e-17;2!UBERON:0004086;1.34e-17;2!UBERON:0005282;1.34e-17;2!UBERON:0005281;1.34e-17;2!UBERON:0005284;1.16e-15;5!UBERON:0002242;4.72e-12;3!UBERON:0011135;1.41e-07;5!UBERON:0002216;1.41e-07;5!UBERON:0011134;1.41e-07;5!UBERON:0002209;1.41e-07;5!UBERON:0002213;1.41e-07;5!UBERON:0007844;1.41e-07;5!UBERON:0011138;1.41e-07;5!UBERON:0001130;1.41e-07;5!UBERON:0001066;1.41e-07;5!UBERON:0001468;1.41e-07;5!UBERON:0006876;2.13e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.23e-17,2;UBERON:0005358,1.23e-17,2;UBERON:0001886,1.23e-17,2;UBERON:0004086,1.23e-17,2;UBERON:0005282,1.23e-17,2;UBERON:0005281,1.23e-17,2;UBERON:0005284,1.00e-15,5;UBERON:0002242,6.59e-12,3;UBERON:0003068,6.59e-12,3;UBERON:0002328,6.59e-12,3;UBERON:0004880,6.59e-12,3;UBERON:0011135,1.72e-07,5;UBERON:0002216,1.72e-07,5;UBERON:0011134,1.72e-07,5;UBERON:0002209,1.72e-07,5;UBERON:0002213,1.72e-07,5;UBERON:0005856,1.72e-07,5;UBERON:0005866,1.72e-07,5;UBERON:0005863,1.72e-07,5;UBERON:0007844,1.72e-07,5;UBERON:0011138,1.72e-07,5;UBERON:0001130,1.72e-07,5;UBERON:0001066,1.72e-07,5;UBERON:0001468,1.72e-07,5;UBERON:0006876,2.00e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.74259811776028,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.665188192387692,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,20.7882413876754,0.860509862246441,0.354668382198357,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0,3.63257826347835,1.15235184896,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.658501712451753,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,3.61727252471503,1.74306691720059,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,1.00034104211935,3.25518028439683,0,0,0,0,0,2.27407504055985,0,0,0,0,0.587403472388222,0.686286847621712,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0.519254429183621,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616194468458578,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.340906509664404,0,0,0,0,0,0,1.88887408098384,0,0,1.06461206063404,0,0,0.143124886741991,3.72158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.471249609382746,0.202182481573316,0,0,0,0.487426979262569,0,0,0.282810863907425,1.13008116620243,0,0,0,0,0.655894752046633,0,0,0.563391205064483,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37004683161367,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0.822251547880505,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.313808538937,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.068296602476,0.542999601753713,0,0,0,0,8.68978911105651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,1.36484205787483,0,0,0,0,0.149254802886874,0,0,5.49268715297758,5.78606174030923,0,2.28840068396924,1.66354016139563,1.08806040407946,0,0.159296767163702,0.449803112163605,0.465788870628778,0.414706207840855,0.797525143673985,0,0.300515217994437,3.04644169735036,0,0,0.429642228169954,0,0,0,0,0,0,0,0,0,0,0,0,0.537266523244462,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,1.06498800657509,1.27820107138737,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:76056397..76056405,- | |||
}} |
Latest revision as of 12:24, 24 July 2015
Short description: | p@chr12:76056397..76056405, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:76056397..76056405, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 4.28e-19 | 4 |
migratory trunk neural crest cell | 4.28e-19 | 4 |
fibroblast of choroid plexus | 1.23e-17 | 2 |
nucleus pulposus cell of intervertebral disc | 6.59e-12 | 3 |
Schwann cell | 9.18e-12 | 2 |
smooth muscle cell of the pulmonary artery | 1.91e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.23e-17 | 2 |
ventricle of nervous system | 1.23e-17 | 2 |
choroid plexus | 1.23e-17 | 2 |
brain ventricle | 1.23e-17 | 2 |
ventricular system of brain | 1.23e-17 | 2 |
ventricular system of central nervous system | 1.23e-17 | 2 |
brain vasculature | 1.00e-15 | 5 |
nucleus pulposus | 6.59e-12 | 3 |
axial mesoderm | 6.59e-12 | 3 |
notochord | 6.59e-12 | 3 |
chordamesoderm | 6.59e-12 | 3 |
intervertebral cartilage | 1.72e-07 | 5 |
symphysis | 1.72e-07 | 5 |
nonsynovial joint | 1.72e-07 | 5 |
fibrous joint | 1.72e-07 | 5 |
cartilaginous joint | 1.72e-07 | 5 |
developing mesenchymal condensation | 1.72e-07 | 5 |
pre-cartilage condensation | 1.72e-07 | 5 |
cartilaginous condensation | 1.72e-07 | 5 |
cartilage element | 1.72e-07 | 5 |
post-cranial axial skeletal system | 1.72e-07 | 5 |
vertebral column | 1.72e-07 | 5 |
intervertebral disk | 1.72e-07 | 5 |
intervertebral joint | 1.72e-07 | 5 |
vasculature of organ | 2.00e-07 | 11 |