FFCP PHASE1:Hg19::chr12:76653682..76653687,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000553247_5end | |association_with_transcript=0bp_to_ENST00000553247_5end | ||
|cluster_id=chr12:76653682..76653687,+ | |||
|coexpression_cluster_id=C528 | |coexpression_cluster_id=C528 | ||
|description=CAGE_peak_1_at_ENST00000553247_5end | |description=CAGE_peak_1_at_ENST00000553247_5end | ||
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|ontology_enrichment_celltype=CL:0000220!7.40e-13!246;CL:0002321!1.49e-12!248;CL:0000055!2.22e-09!180;CL:0002139!4.59e-09!24;CL:0000222!6.00e-09!119;CL:0002371!1.07e-08!591;CL:0000183!4.24e-08!59;CL:0000192!6.09e-08!42;CL:0000514!6.09e-08!42;CL:0000680!9.22e-08!57;CL:0000056!9.22e-08!57;CL:0000355!9.22e-08!57;CL:0000071!2.56e-07!18;CL:0002546!2.56e-07!18;CL:0002159!2.90e-07!13;CL:0000187!3.21e-07!54;CL:0000144!3.41e-07!625;CL:0000359!6.09e-07!32;CL:0000057!9.60e-07!75 | |ontology_enrichment_celltype=CL:0000220!7.40e-13!246;CL:0002321!1.49e-12!248;CL:0000055!2.22e-09!180;CL:0002139!4.59e-09!24;CL:0000222!6.00e-09!119;CL:0002371!1.07e-08!591;CL:0000183!4.24e-08!59;CL:0000192!6.09e-08!42;CL:0000514!6.09e-08!42;CL:0000680!9.22e-08!57;CL:0000056!9.22e-08!57;CL:0000355!9.22e-08!57;CL:0000071!2.56e-07!18;CL:0002546!2.56e-07!18;CL:0002159!2.90e-07!13;CL:0000187!3.21e-07!54;CL:0000144!3.41e-07!625;CL:0000359!6.09e-07!32;CL:0000057!9.60e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.02e-15;14!CL:0002368;1.60e-12;13!CL:0002166;2.02e-12;3!CL:0002621;1.38e-11;3!CL:0002076;1.12e-08;42!CL:0000317;1.51e-08;2!CL:1000448;1.51e-08;2!CL:0002308;1.51e-08;2!CL:0002140;1.51e-08;2!CL:0000244;2.60e-08;4!CL:0000731;2.60e-08;4 | |ontology_enrichment_celltype_v019=CL:0002159;1.02e-15;14!CL:0002368;1.60e-12;13!CL:0002166;2.02e-12;3!CL:0002621;1.38e-11;3!CL:0002076;1.12e-08;42!CL:0000317;1.51e-08;2!CL:1000448;1.51e-08;2!CL:0002308;1.51e-08;2!CL:0002140;1.51e-08;2!CL:0000244;2.60e-08;4!CL:0000731;2.60e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.01e-15,14;CL:0002368,1.43e-12,13;CL:0002166,2.04e-12,3;CL:0002321,9.00e-12,250;CL:0002621,1.25e-11,3;CL:0002076,1.06e-09,42;CL:0000244,1.32e-08,4;CL:0000731,1.32e-08,4;CL:0000317,1.38e-08,2;CL:1000448,1.38e-08,2;CL:0002308,1.38e-08,2;CL:0002140,1.38e-08,2;CL:0000066,3.46e-07,253;CL:0002077,4.26e-07,34;CL:0000362,9.55e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.22e-14!69;UBERON:0002049!1.69e-14!79;UBERON:0007798!1.69e-14!79;UBERON:0001637!2.53e-13!42;UBERON:0003509!2.53e-13!42;UBERON:0004572!2.53e-13!42;UBERON:0004872!4.68e-12!84;UBERON:0001981!7.05e-12!60;UBERON:0007500!7.05e-12!60;UBERON:0004537!7.05e-12!60;UBERON:0006965!7.05e-12!60;UBERON:0004535!5.30e-11!110;UBERON:0000486!1.31e-10!82;UBERON:0001009!2.45e-10!113;UBERON:0000119!2.64e-10!312;UBERON:0004573!9.02e-10!33;UBERON:0004571!9.02e-10!33;UBERON:0000483!3.07e-09!309;UBERON:0000490!6.37e-09!138;UBERON:0000947!9.99e-09!21;UBERON:0010191!9.99e-09!21;UBERON:0004290!1.03e-07!70;UBERON:0001986!2.56e-07!18;UBERON:0004638!2.56e-07!18;UBERON:0004852!2.56e-07!18;UBERON:0001134!2.64e-07!61;UBERON:0002036!2.64e-07!61;UBERON:0003082!2.64e-07!61;UBERON:0000914!2.83e-07!83;UBERON:0002329!2.83e-07!83;UBERON:0003077!2.83e-07!83;UBERON:0003059!2.83e-07!83;UBERON:0007282!2.83e-07!83;UBERON:0009618!2.83e-07!83;UBERON:0007285!2.83e-07!83;UBERON:0002385!7.86e-07!63;UBERON:0001015!7.86e-07!63;UBERON:0000383!7.86e-07!63 | |ontology_enrichment_uberon=UBERON:0000055!1.22e-14!69;UBERON:0002049!1.69e-14!79;UBERON:0007798!1.69e-14!79;UBERON:0001637!2.53e-13!42;UBERON:0003509!2.53e-13!42;UBERON:0004572!2.53e-13!42;UBERON:0004872!4.68e-12!84;UBERON:0001981!7.05e-12!60;UBERON:0007500!7.05e-12!60;UBERON:0004537!7.05e-12!60;UBERON:0006965!7.05e-12!60;UBERON:0004535!5.30e-11!110;UBERON:0000486!1.31e-10!82;UBERON:0001009!2.45e-10!113;UBERON:0000119!2.64e-10!312;UBERON:0004573!9.02e-10!33;UBERON:0004571!9.02e-10!33;UBERON:0000483!3.07e-09!309;UBERON:0000490!6.37e-09!138;UBERON:0000947!9.99e-09!21;UBERON:0010191!9.99e-09!21;UBERON:0004290!1.03e-07!70;UBERON:0001986!2.56e-07!18;UBERON:0004638!2.56e-07!18;UBERON:0004852!2.56e-07!18;UBERON:0001134!2.64e-07!61;UBERON:0002036!2.64e-07!61;UBERON:0003082!2.64e-07!61;UBERON:0000914!2.83e-07!83;UBERON:0002329!2.83e-07!83;UBERON:0003077!2.83e-07!83;UBERON:0003059!2.83e-07!83;UBERON:0007282!2.83e-07!83;UBERON:0009618!2.83e-07!83;UBERON:0007285!2.83e-07!83;UBERON:0002385!7.86e-07!63;UBERON:0001015!7.86e-07!63;UBERON:0000383!7.86e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0000947;1.15e-11;21!UBERON:0010191;1.15e-11;21!UBERON:0001949;1.38e-11;3!UBERON:0000486;4.72e-10;12!UBERON:0004573;7.17e-10;33!UBERON:0004571;7.17e-10;33!UBERON:0001708;2.10e-09;4!UBERON:0008895;2.10e-09;4!UBERON:0002419;1.51e-08;2!UBERON:0007771;1.51e-08;2!UBERON:0003297;1.51e-08;2!UBERON:0001821;1.51e-08;2!UBERON:0003487;1.51e-08;2!UBERON:0001820;1.51e-08;2!UBERON:0011159;1.38e-07;5!UBERON:0007500;1.55e-07;56!UBERON:0001981;1.55e-07;56!UBERON:0004537;1.55e-07;56!UBERON:0001637;1.69e-07;42!UBERON:0003509;1.69e-07;42!UBERON:0004572;1.69e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0000947;1.15e-11;21!UBERON:0010191;1.15e-11;21!UBERON:0001949;1.38e-11;3!UBERON:0000486;4.72e-10;12!UBERON:0004573;7.17e-10;33!UBERON:0004571;7.17e-10;33!UBERON:0001708;2.10e-09;4!UBERON:0008895;2.10e-09;4!UBERON:0002419;1.51e-08;2!UBERON:0007771;1.51e-08;2!UBERON:0003297;1.51e-08;2!UBERON:0001821;1.51e-08;2!UBERON:0003487;1.51e-08;2!UBERON:0001820;1.51e-08;2!UBERON:0011159;1.38e-07;5!UBERON:0007500;1.55e-07;56!UBERON:0001981;1.55e-07;56!UBERON:0004537;1.55e-07;56!UBERON:0001637;1.69e-07;42!UBERON:0003509;1.69e-07;42!UBERON:0004572;1.69e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.14e-11,21;UBERON:0010191,1.14e-11,21;UBERON:0001949,1.25e-11,3;UBERON:0004573,2.79e-10,33;UBERON:0004571,2.79e-10,33;UBERON:0001708,2.11e-09,4;UBERON:0008895,2.11e-09,4;UBERON:0001637,3.78e-09,42;UBERON:0003509,3.78e-09,42;UBERON:0004572,3.78e-09,42;UBERON:0000055,6.08e-09,68;UBERON:0002419,1.38e-08,2;UBERON:0007771,1.38e-08,2;UBERON:0003297,1.38e-08,2;UBERON:0001821,1.38e-08,2;UBERON:0003487,1.38e-08,2;UBERON:0001820,1.38e-08,2;UBERON:0005089,1.38e-08,2;UBERON:0005088,1.38e-08,2;UBERON:0007500,4.23e-08,59;UBERON:0001981,4.23e-08,59;UBERON:0004537,4.23e-08,59;UBERON:0006965,4.23e-08,59;UBERON:0011159,1.38e-07,5;UBERON:0002049,2.37e-07,78;UBERON:0007798,2.37e-07,78;UBERON:0000365,5.89e-07,5 | |||
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| ||
|short_description=p1@ENST00000553247 | |short_description=p1@ENST00000553247 | ||
}} | }} |
Latest revision as of 12:28, 24 July 2015
Short description: | p1@ENST00000553247 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000553247_5end |
Coexpression cluster: | C528_Gingival_Mallassezderived_Keratinocyte_Sebocyte_Prostate_Urothelial_Small |
Association with transcript: | 0bp_to_ENST00000553247_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.01e-15 | 14 |
respiratory epithelial cell | 1.43e-12 | 13 |
epithelial cell of Malassez | 2.04e-12 | 3 |
embryonic cell | 9.00e-12 | 250 |
gingival epithelial cell | 1.25e-11 | 3 |
endo-epithelial cell | 1.06e-09 | 42 |
transitional epithelial cell | 1.32e-08 | 4 |
urothelial cell | 1.32e-08 | 4 |
sebum secreting cell | 1.38e-08 | 2 |
epithelial cell of sweat gland | 1.38e-08 | 2 |
epithelial cell of skin gland | 1.38e-08 | 2 |
acinar cell of sebaceous gland | 1.38e-08 | 2 |
epithelial cell | 3.46e-07 | 253 |
ecto-epithelial cell | 4.26e-07 | 34 |
epidermal cell | 9.55e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
aorta | 1.14e-11 | 21 |
aortic system | 1.14e-11 | 21 |
gingival epithelium | 1.25e-11 | 3 |
systemic artery | 2.79e-10 | 33 |
systemic arterial system | 2.79e-10 | 33 |
jaw skeleton | 2.11e-09 | 4 |
splanchnocranium | 2.11e-09 | 4 |
artery | 3.78e-09 | 42 |
arterial blood vessel | 3.78e-09 | 42 |
arterial system | 3.78e-09 | 42 |
vessel | 6.08e-09 | 68 |
skin gland | 1.38e-08 | 2 |
epidermis gland | 1.38e-08 | 2 |
gland of integumental system | 1.38e-08 | 2 |
sebaceous gland | 1.38e-08 | 2 |
skin sebaceous gland | 1.38e-08 | 2 |
sweat gland | 1.38e-08 | 2 |
sweat gland placode | 1.38e-08 | 2 |
sebaceous gland placode | 1.38e-08 | 2 |
epithelial tube open at both ends | 4.23e-08 | 59 |
blood vessel | 4.23e-08 | 59 |
blood vasculature | 4.23e-08 | 59 |
vascular cord | 4.23e-08 | 59 |
primary subdivision of cranial skeletal system | 1.38e-07 | 5 |
vasculature | 2.37e-07 | 78 |
vascular system | 2.37e-07 | 78 |
urothelium | 5.89e-07 | 5 |