FFCP PHASE1:Hg19::chr12:76922107..76922112,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:76922107..76922112,- | |||
|coexpression_cluster_id=C474 | |||
|description=CAGE_peak_at_chr12:76922107..76922112,- | |||
|id=chr12:76922107..76922112,- | |||
|ontology_enrichment_celltype=CL:0000738!8.79e-15!140;CL:0002087!3.15e-14!119;CL:0002031!5.42e-12!124;CL:0000037!2.38e-11!172;CL:0000566!2.38e-11!172;CL:0002032!2.63e-10!165;CL:0000837!2.63e-10!165;CL:0000988!6.52e-10!182;CL:0000624!1.04e-09!6;CL:0000766!7.79e-09!76;CL:0002194!1.69e-07!63;CL:0000576!1.69e-07!63;CL:0000040!1.69e-07!63;CL:0000559!1.69e-07!63;CL:0000839!1.90e-07!70;CL:0000557!3.01e-07!71;CL:0000791!4.37e-07!18;CL:0000789!4.37e-07!18;CL:0002420!4.37e-07!18;CL:0002419!4.37e-07!18;CL:0000790!4.37e-07!18;CL:0002009!4.48e-07!65;CL:0002057!4.84e-07!42;CL:0000860!5.20e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0002393;2.64e-15;6!CL:0002397;2.64e-15;6!CL:0000775;8.43e-14;3!CL:0000623;1.20e-13;3!CL:0000791;3.79e-13;18!CL:0000789;3.79e-13;18!CL:0002419;3.79e-13;18!CL:0000094;2.66e-11;8!CL:0000084;1.97e-09;25!CL:0000081;2.33e-08;11!CL:0000625;2.68e-08;11!CL:0000542;4.88e-08;53!CL:0000624;2.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,6.96e-14,3;CL:0000623,1.09e-13,3;CL:0000825,1.09e-13,3;CL:0000838,1.59e-13,52;CL:0000738,2.99e-13,136;CL:0000542,3.01e-13,53;CL:0000051,3.01e-13,53;CL:0000791,3.21e-13,18;CL:0000789,3.21e-13,18;CL:0002420,3.21e-13,18;CL:0002419,3.21e-13,18;CL:0000790,3.21e-13,18;CL:0002032,1.48e-12,161;CL:0000837,1.48e-12,161;CL:0000037,6.29e-12,168;CL:0000094,2.57e-11,8;CL:0000988,3.41e-11,177;CL:0002393,2.30e-10,9;CL:0002397,2.30e-10,9;CL:0002087,6.08e-10,115;CL:0000084,1.75e-09,25;CL:0000827,1.75e-09,25;CL:0002031,1.88e-09,120;CL:0000081,2.27e-08,11;CL:0000625,2.27e-08,11;CL:0000624,2.23e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;3.79e-13;18!CL:0000051;4.88e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.48e-09!102;UBERON:0003061!7.48e-09!102;UBERON:0002193!8.42e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;4.80e-11;1!UBERON:0005208;4.80e-11;1!UBERON:0004145;4.80e-11;1!UBERON:0005946;4.80e-11;1!UBERON:0005965;4.80e-11;1!UBERON:0002078;4.80e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,3.76e-11,1;UBERON:0005208,3.76e-11,1;UBERON:0005946,3.76e-11,1;UBERON:0005965,3.76e-11,1;UBERON:0002078,3.76e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,4.43196326825502,5.01361118675354,2.17010870715852,0,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0.425208599930087,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,1.1384259382189,1.17447437874188,0.764546456250458,1.32171328579026,1.12101712596307,0,2.360517241366,2.35806457649499,0.205601498999509,0,0.32592226663359,1.4203434172042,0,0,0.883817722424512,0.221533894583621,0,0,0.260118695119756,0.328875809207352,0,0,0.593146252648242,0,0,0.226618685395132,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,1.41124720257313,2.40696176205157,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.985153801009636,2.15627574859517,1.66845947163673,0,0,0,0,0,1.49801404789436,5.9832291840805,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,1.52927441428475,0,0.476463550915578,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,5.01268954180134,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,0,0.361789315876224,0,0,0,0.438770794307945,0.10893846351899,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,2.87149209830726,0,0,0,0.201550417460179,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0.28984205722165,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0,0.194860308839388,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0.558644917973244,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0,0.098150233615243,0,0,0.205325613712494,0,0.485710993059139,0,0,0.356760272332706,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr12:76922107..76922112,- | |||
}} |
Latest revision as of 12:29, 24 July 2015
Short description: | p@chr12:76922107..76922112, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:76922107..76922112, - |
Coexpression cluster: | C474_Neutrophils_CD4_CD8_Natural_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 6.96e-14 | 3 |
natural killer cell | 1.09e-13 | 3 |
pro-NK cell | 1.09e-13 | 3 |
lymphoid lineage restricted progenitor cell | 1.59e-13 | 52 |
leukocyte | 2.99e-13 | 136 |
lymphocyte | 3.01e-13 | 53 |
common lymphoid progenitor | 3.01e-13 | 53 |
mature alpha-beta T cell | 3.21e-13 | 18 |
alpha-beta T cell | 3.21e-13 | 18 |
immature T cell | 3.21e-13 | 18 |
mature T cell | 3.21e-13 | 18 |
immature alpha-beta T cell | 3.21e-13 | 18 |
hematopoietic oligopotent progenitor cell | 1.48e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.48e-12 | 161 |
hematopoietic stem cell | 6.29e-12 | 168 |
granulocyte | 2.57e-11 | 8 |
hematopoietic cell | 3.41e-11 | 177 |
intermediate monocyte | 2.30e-10 | 9 |
CD14-positive, CD16-positive monocyte | 2.30e-10 | 9 |
nongranular leukocyte | 6.08e-10 | 115 |
T cell | 1.75e-09 | 25 |
pro-T cell | 1.75e-09 | 25 |
hematopoietic lineage restricted progenitor cell | 1.88e-09 | 120 |
blood cell | 2.27e-08 | 11 |
CD8-positive, alpha-beta T cell | 2.27e-08 | 11 |
CD4-positive, alpha-beta T cell | 2.23e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 3.76e-11 | 1 |
right atrium valve | 3.76e-11 | 1 |
outflow tract of atrium | 3.76e-11 | 1 |
outflow part of right atrium | 3.76e-11 | 1 |
right cardiac atrium | 3.76e-11 | 1 |