FFCP PHASE1:Hg19::chr12:88949992..88949995,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:88949992..88949995,- | |||
|description=CAGE_peak_at_chr12:88949992..88949995,- | |description=CAGE_peak_at_chr12:88949992..88949995,- | ||
|id=chr12:88949992..88949995,- | |id=chr12:88949992..88949995,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;3.28e-23;1!CL:0002615;1.21e-08;3!CL:0002592;1.21e-08;3 | |ontology_enrichment_celltype_v019=CL:0000222;3.28e-23;1!CL:0002615;1.21e-08;3!CL:0002592;1.21e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002592,1.12e-08,3;CL:0002615,1.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.81e-07;30 | |ontology_enrichment_development_v019=UBERON:0001041;2.81e-07;30 | ||
|ontology_enrichment_disease=DOID:0050687!7.85e-07!143 | |ontology_enrichment_disease=DOID:0050687!7.85e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:5409;8.61e-07;4 | |ontology_enrichment_disease_v019=DOID:5409;8.61e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,7.27e-07,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.58e-45;2!UBERON:0002757;5.58e-45;2!UBERON:0010134;5.58e-45;2!UBERON:0005408;5.58e-45;2!UBERON:0001899;5.58e-45;2!UBERON:0002171;3.28e-23;1!UBERON:0006518;3.28e-23;1!UBERON:0008949;3.28e-23;1!UBERON:0000101;3.28e-23;1!UBERON:0002167;3.28e-23;1!UBERON:0003296;4.34e-23;4!UBERON:0010133;4.34e-23;4!UBERON:0002784;4.34e-23;4!UBERON:0001894;1.19e-13;7!UBERON:0003498;1.21e-08;3!UBERON:0005985;1.21e-08;3!UBERON:0001621;1.21e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0001905;5.58e-45;2!UBERON:0002757;5.58e-45;2!UBERON:0010134;5.58e-45;2!UBERON:0005408;5.58e-45;2!UBERON:0001899;5.58e-45;2!UBERON:0002171;3.28e-23;1!UBERON:0006518;3.28e-23;1!UBERON:0008949;3.28e-23;1!UBERON:0000101;3.28e-23;1!UBERON:0002167;3.28e-23;1!UBERON:0003296;4.34e-23;4!UBERON:0010133;4.34e-23;4!UBERON:0002784;4.34e-23;4!UBERON:0001894;1.19e-13;7!UBERON:0003498;1.21e-08;3!UBERON:0005985;1.21e-08;3!UBERON:0001621;1.21e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.00e-45,2;UBERON:0002757,4.00e-45,2;UBERON:0010134,4.00e-45,2;UBERON:0005408,4.00e-45,2;UBERON:0001899,4.00e-45,2;UBERON:0003296,3.68e-23,4;UBERON:0010133,3.68e-23,4;UBERON:0002784,3.68e-23,4;UBERON:0002171,5.13e-23,1;UBERON:0006518,5.13e-23,1;UBERON:0008949,5.13e-23,1;UBERON:0000101,5.13e-23,1;UBERON:0002167,5.13e-23,1;UBERON:0001894,1.08e-13,7;UBERON:0006222,1.08e-13,7;UBERON:0001621,1.12e-08,3 | |||
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| ||
|short_description=p@chr12:88949992..88949995,- | |short_description=p@chr12:88949992..88949995,- | ||
}} | }} |
Latest revision as of 13:12, 24 July 2015
Short description: | p@chr12:88949992..88949995, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:88949992..88949995, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 1.12e-08 | 3 |
adipocyte of omentum tissue | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.00e-45 | 2 |
regional part of epithalamus | 4.00e-45 | 2 |
secretory circumventricular organ | 4.00e-45 | 2 |
circumventricular organ | 4.00e-45 | 2 |
epithalamus | 4.00e-45 | 2 |
gland of diencephalon | 3.68e-23 | 4 |
neuroendocrine gland | 3.68e-23 | 4 |
regional part of diencephalon | 3.68e-23 | 4 |
lower lobe of right lung | 5.13e-23 | 1 |
right lung lobe | 5.13e-23 | 1 |
lower lobe of lung | 5.13e-23 | 1 |
lobe of lung | 5.13e-23 | 1 |
right lung | 5.13e-23 | 1 |
diencephalon | 1.08e-13 | 7 |
future diencephalon | 1.08e-13 | 7 |
coronary artery | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.27e-07 | 4 |